Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0667
(665 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 47 1e-07
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 46 3e-07
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 46 3e-07
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 45 6e-07
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 43 2e-06
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 42 3e-06
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 42 6e-06
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 34 0.001
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 31 0.011
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 30 0.015
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 24 0.97
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 47.2 bits (107), Expect = 1e-07
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
H + FVC CGK F RS L H++ H+G + FAC IC K
Sbjct: 339 HTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPICNK 382
Score = 42.3 bits (95), Expect = 3e-06
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 30 CKVQECGKSFHRSYYLSEHMKVHSGVRPFACN--ICGK 137
C + CGK + ++ +L H++ H+G RPF CN CGK
Sbjct: 317 CHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGK 354
Score = 34.3 bits (75), Expect = 0.001
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSG 104
H K+F C + C K F RS +L++H+K H+G
Sbjct: 369 HTGEKRFACPI--CNKRFMRSDHLAKHVKTHNG 399
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 46.0 bits (104), Expect = 3e-07
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
H K F C QEC K F R ++L HM++H+G RP+ C C +
Sbjct: 4 HTGEKPFEC--QECHKRFTRDHHLKTHMRLHTGERPYRCEHCDR 45
Score = 33.5 bits (73), Expect = 0.002
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 33 KVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
+ + C + F + L H++VH+G RP+ C C
Sbjct: 39 RCEHCDRQFVQVANLRRHLRVHTGERPYGCEHC 71
Score = 23.0 bits (47), Expect = 2.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 90 KVHSGVRPFACNICGK 137
+ H+G +PF C C K
Sbjct: 2 RTHTGEKPFECQECHK 17
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 46.0 bits (104), Expect = 3e-07
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
H K F C QEC K F R ++L HM++H+G RP+ C C +
Sbjct: 157 HTGEKPFEC--QECHKRFTRDHHLKTHMRLHTGERPYRCEHCDR 198
Score = 37.5 bits (83), Expect = 1e-04
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 18 KKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
+ F C+V C +SF + L H + H+G +PF C C K
Sbjct: 133 RPFTCEV--CNRSFGYKHVLQNHERTHTGEKPFECQECHK 170
Score = 33.5 bits (73), Expect = 0.002
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 33 KVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
+ + C + F + L H++VH+G RP+ C C
Sbjct: 192 RCEHCDRQFVQVANLRRHLRVHTGERPYGCEHC 224
Score = 30.3 bits (65), Expect = 0.015
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
H + + C + C F S L H+ +H+ +PF C+ C
Sbjct: 213 HTGERPYGC--EHCSMKFSDSNQLKAHVLIHTNEKPFECDKC 252
Score = 23.8 bits (49), Expect = 1.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 18 KKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGKT 140
K+ KV+E S S +S +K S RPF C +C ++
Sbjct: 105 KRKTWKVEEDSPSPTSS--VSPEVKDSSRDRPFTCEVCNRS 143
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 44.8 bits (101), Expect = 6e-07
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 18 KKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
++F+CK C + F +SY L H + H+ RP++C+ICGK
Sbjct: 78 RQFICKY--CNRQFTKSYNLLIHERTHTDERPYSCDICGK 115
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEH 86
H + + C + CGK+F R +L +H
Sbjct: 102 HTDERPYSCDI--CGKAFRRQDHLRDH 126
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 43.2 bits (97), Expect = 2e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 3 EHETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGKT 140
E + K VC++ CGKS+ R L H++ HSG +P+ C C K+
Sbjct: 243 EEDNQKPNVCRI--CGKSYARPSTLKTHLRTHSGEKPYRCIDCNKS 286
Score = 42.3 bits (95), Expect = 3e-06
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
H K F C V C + F +S ++ HM+ HSG RP+ C +C K
Sbjct: 300 HSGEKPFRCPV--CDRRFSQSSSVTTHMRTHSGERPYRCRLCKK 341
Score = 40.3 bits (90), Expect = 1e-05
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
H K + C +C KSF ++ L+ H++ HSG +PF C +C +
Sbjct: 272 HSGEKPYRCI--DCNKSFSQAANLTAHVRTHSGEKPFRCPVCDR 313
Score = 39.9 bits (89), Expect = 2e-05
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
H + + C++ C K+F S L++H+++HSG +P+ C +C
Sbjct: 328 HSGERPYRCRL--CKKAFSDSSTLTKHLRIHSGEKPYECKLC 367
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 42.3 bits (95), Expect = 3e-06
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
H K F C V C + F +S ++ HM+ HSG RP+ C +C K
Sbjct: 44 HSGEKPFRCPV--CDRRFSQSSSVTTHMRTHSGERPYRCRLCKK 85
Score = 40.3 bits (90), Expect = 1e-05
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
H K + C +C KSF ++ L+ H++ HSG +PF C +C +
Sbjct: 16 HSGEKPYRCI--DCNKSFSQAANLTAHVRTHSGEKPFRCPVCDR 57
Score = 39.9 bits (89), Expect = 2e-05
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
H + + C++ C K+F S L++H+++HSG +P+ C +C
Sbjct: 72 HSGERPYRCRL--CKKAFSDSSTLTKHLRIHSGEKPYECKLC 111
Score = 32.3 bits (70), Expect = 0.004
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 51 KSFHRSYYLSEHMKVHSGVRPFACNICGKT 140
KS+ R L H++ HSG +P+ C C K+
Sbjct: 1 KSYARPSTLKTHLRTHSGEKPYRCIDCNKS 30
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 41.5 bits (93), Expect = 6e-06
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 30 CKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
CK C K+F R + L H++ H+G +PF+C C +
Sbjct: 8 CKCTICPKAFSRPWLLQGHIRTHTGEKPFSCTYCNR 43
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 33.9 bits (74), Expect = 0.001
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 3 EHETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGK 137
EH+ + C + C + L H + H+G RPF C ICG+
Sbjct: 128 EHKLSDPNQCVI--CHRVLSCKSALQMHYRTHTGERPFKCKICGR 170
Score = 28.7 bits (61), Expect = 0.045
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPF----ACNICGK 137
H + F CK+ CG++F L HM VH P C +C K
Sbjct: 157 HTGERPFKCKI--CGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHK 202
Score = 23.4 bits (48), Expect = 1.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 45 CGKSFHRSYYLSEHMKVHSG 104
C K F + L +H+++H+G
Sbjct: 200 CHKKFTNALVLQQHIRLHTG 219
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 30.7 bits (66), Expect = 0.011
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 18 KKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNICGKT 140
K+ C +C ++L H++ H+G +PF CN C T
Sbjct: 229 KRLTCP--KCPFITEYKHHLEYHLRNHAGSKPFQCNKCDYT 267
Score = 29.9 bits (64), Expect = 0.020
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 39 QECGKSFHRSYYLSEHMKVHSGVRPFACNICG 134
Q C +F + + HM H PF CN+CG
Sbjct: 474 QYCNIAFGDAVLYTIHMGYHGFHNPFTCNMCG 505
Score = 29.1 bits (62), Expect = 0.034
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
H +K F C +C + L+ HMK HS V ++C C
Sbjct: 253 HAGSKPFQCN--KCDYTCVNKSMLNSHMKSHSNVYRYSCRDC 292
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 30.3 bits (65), Expect = 0.015
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 69 YYLSEHMKVHSGVRPFACNICGKT 140
++L H++ H+G +PF CN C T
Sbjct: 2 HHLEYHLRNHAGSKPFQCNKCDYT 25
Score = 29.1 bits (62), Expect = 0.034
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 6 HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
H +K F C +C + L+ HMK HS V ++C C
Sbjct: 11 HAGSKPFQCN--KCDYTCVNKSMLNSHMKSHSNVYRYSCRDC 50
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 24.2 bits (50), Expect = 0.97
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 183 GGSLCACCD*TC-CSMSSRRCYKRTDGPRCGPSCARTDSSSDGT 55
G C C TC +C + + +C +CAR D S +GT
Sbjct: 770 GFDSCTVC--TCDAKYLEIKCKRIYNEKQCCKNCARVDYSMNGT 811
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,348
Number of Sequences: 336
Number of extensions: 2642
Number of successful extensions: 37
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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