Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0667
         (665 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    36   0.001
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   2.8  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   2.8  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   8.7  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 35.9 bits (79), Expect = 0.001
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 6   HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
           H   K F C    C  +    + L+ HM++H+G +P++C++C
Sbjct: 234 HTGEKPFQCP--HCTYASPDKFKLTRHMRIHTGEKPYSCDVC 273



 Score = 33.1 bits (72), Expect = 0.008
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 3   EHETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
           +  T   ++C    C  + ++ + LS H+K HS  RP  C +C
Sbjct: 120 QQSTGSTYMCNY--CNYTSNKLFLLSRHLKTHSEDRPHKCVVC 160



 Score = 29.1 bits (62), Expect = 0.13
 Identities = 13/42 (30%), Positives = 16/42 (38%)
 Frame = +3

Query: 6   HETAKKFVCKVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
           H   K   CK   C  +F   Y    H K H G + + C  C
Sbjct: 321 HTADKPIKCK--RCDSTFPDRYSYKMHAKTHEGEKCYRCEYC 360



 Score = 27.9 bits (59), Expect = 0.30
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 33  KVQECGKSFHRSYYLSEHMKVHSGVRPFACNIC 131
           K  EC  +      L  H++ H+G +PF C  C
Sbjct: 213 KCTECDYASVELSKLKRHIRTHTGEKPFQCPHC 245


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 231 NVGGATTPLWPRAPAR 184
           N+GG T P+ P+ P R
Sbjct: 63  NIGGTTIPIAPKKPTR 78


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 231 NVGGATTPLWPRAPARGGSLCACC 160
           N G  +TPLW R    G  LC  C
Sbjct: 122 NCGAISTPLW-RRDGTGHYLCNAC 144


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = -3

Query: 150 CCSMSSRRCYKRTDGPRCGPSCARTDSSSDGTTYRTPGPCRRTS 19
           C S   R  Y  T+G  C PS  R   SSDG      GPC  T+
Sbjct: 157 CDSRYERDTYNCTEGCFCKPSYIR---SSDG------GPCIPTN 191


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,037
Number of Sequences: 2352
Number of extensions: 11283
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)