Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0666
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation ... 123 6e-28
CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein. 123 6e-28
BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongatio... 123 6e-28
AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongatio... 123 6e-28
AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongatio... 116 7e-26
AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongatio... 116 7e-26
AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongatio... 116 7e-26
X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation ... 85 2e-16
X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation ... 85 2e-16
M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation ... 85 2e-16
CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein. 85 2e-16
BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongatio... 85 2e-16
BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongatio... 85 2e-16
X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation ... 83 1e-15
BC050623-1|AAH50623.1| 242|Homo sapiens TCEA2 protein protein. 78 2e-14
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 73 7e-13
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 73 7e-13
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 73 7e-13
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 73 7e-13
AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antige... 66 8e-11
AL590548-2|CAI13199.1| 82|Homo sapiens transcription elongatio... 62 2e-09
AJ844627-1|CAH59746.1| 86|Homo sapiens transcription elongatio... 57 5e-08
AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens ... 42 0.002
D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein. 40 0.006
BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3 pr... 40 0.006
BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3 pr... 40 0.006
AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3 pr... 40 0.006
AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3 pr... 40 0.006
AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3 pr... 40 0.006
BC035374-1|AAH35374.1| 208|Homo sapiens chromosome 1 open readi... 40 0.010
AL353898-9|CAI22669.1| 208|Homo sapiens chromosome 1 open readi... 40 0.010
AL353898-8|CAI22668.1| 238|Homo sapiens chromosome 1 open readi... 40 0.010
AK056674-1|BAB71250.1| 208|Homo sapiens protein ( Homo sapiens ... 40 0.010
BC110430-1|AAI10431.1| 600|Homo sapiens mediator complex subuni... 39 0.018
AF104253-1|AAD12722.1| 600|Homo sapiens transcriptional co-acti... 39 0.018
L47345-1|AAA75492.1| 772|Homo sapiens elongin A protein. 38 0.024
BC002883-1|AAH02883.1| 772|Homo sapiens transcription elongatio... 38 0.024
AL031295-2|CAB40157.1| 772|Homo sapiens transcription elongatio... 38 0.024
AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterat... 35 0.22
AY481571-1|AAS49898.1| 1189|Homo sapiens death inducer-obliterat... 35 0.22
AL117379-2|CAM28273.1| 1189|Homo sapiens death inducer-obliterat... 35 0.22
AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterat... 35 0.22
AL035669-2|CAI95770.2| 1189|Homo sapiens death inducer-obliterat... 35 0.22
AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterat... 35 0.22
AB002331-1|BAA20791.2| 1223|Homo sapiens KIAA0333 protein. 35 0.22
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 32 1.6
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.6
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 32 1.6
BC005267-1|AAH05267.1| 312|Homo sapiens PPP1R10 protein protein. 32 1.6
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 32 1.6
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.6
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.6
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 32 1.6
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.6
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 32 1.6
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.6
>D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation
factor S-II, hS-II-T1 protein.
Length = 299
Score = 123 bits (296), Expect = 6e-28
Identities = 78/212 (36%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 231 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 374
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 375 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 554
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 555 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 211
>CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein.
Length = 299
Score = 123 bits (296), Expect = 6e-28
Identities = 78/212 (36%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 231 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 374
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 375 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 554
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 555 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 211
>BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 123 bits (296), Expect = 6e-28
Identities = 78/212 (36%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 231 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 374
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 375 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 554
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 555 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 211
>AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 123 bits (296), Expect = 6e-28
Identities = 78/212 (36%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 231 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 374
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 375 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 554
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 555 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 211
>AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 272
Score = 116 bits (279), Expect = 7e-26
Identities = 71/177 (40%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLST------------ 299
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 300 PNTTXXXXXXXXXXXXXXXXXXXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAG 479
P T +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 480 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 184
>AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 270
Score = 116 bits (279), Expect = 7e-26
Identities = 71/177 (40%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLST------------ 299
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 300 PNTTXXXXXXXXXXXXXXXXXXXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAG 479
P T +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 480 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 184
>AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 246
Score = 116 bits (279), Expect = 7e-26
Identities = 71/177 (40%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLST------------ 299
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 300 PNTTXXXXXXXXXXXXXXXXXXXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAG 479
P T +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 480 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 184
>X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +3
Query: 393 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 572
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 573 KNRVRSRVANLKDPKNPTLRTNFFNG 650
KNRVRSR++NLKD KNP LR N G
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCG 213
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 57 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 236
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 237 DDEVISLCKTLIKNWKKFLSTPNT 308
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation
factor protein.
Length = 280
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +3
Query: 393 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 572
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 107 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 166
Query: 573 KNRVRSRVANLKDPKNPTLRTNFFNG 650
KNRVRSR++NLKD KNP LR N G
Sbjct: 167 KNRVRSRISNLKDAKNPNLRKNVLCG 192
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +3
Query: 192 TRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNT 308
TRIGM+VNA+RK S D+EV SL K+LIK+WKK L P+T
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPST 61
>M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation
factor SII protein.
Length = 301
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +3
Query: 393 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 572
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 573 KNRVRSRVANLKDPKNPTLRTNFFNG 650
KNRVRSR++NLKD KNP LR N G
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCG 213
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 57 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 236
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 237 DDEVISLCKTLIKNWKKFLSTPNT 308
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein.
Length = 301
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +3
Query: 393 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 572
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 573 KNRVRSRVANLKDPKNPTLRTNFFNG 650
KNRVRSR++NLKD KNP LR N G
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCG 213
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 57 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 236
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 237 DDEVISLCKTLIKNWKKFLSTPNT 308
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +3
Query: 393 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 572
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 573 KNRVRSRVANLKDPKNPTLRTNFFNG 650
KNRVRSR++NLKD KNP LR N G
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCG 213
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 57 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 236
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 237 DDEVISLCKTLIKNWKKFLSTPNT 308
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 85.0 bits (201), Expect = 2e-16
Identities = 41/86 (47%), Positives = 52/86 (60%)
Frame = +3
Query: 393 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 572
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 573 KNRVRSRVANLKDPKNPTLRTNFFNG 650
KNRVRSR++NLKD KNP LR N G
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCG 213
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 57 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 236
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 237 DDEVISLCKTLIKNWKKFLSTPNT 308
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 82.6 bits (195), Expect = 1e-15
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 393 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 572
+SFP +T+D+V+LKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVQLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 573 KNRVRSRVANLKDPKNPTLRTNFFNG 650
KNRVRSR++NLKD KNP LR N G
Sbjct: 188 KNRVRSRISNLKDAKNPYLRKNVLCG 213
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +3
Query: 57 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 236
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 237 DDEVISLCKTLIKNWKKFLSTPNT 308
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>BC050623-1|AAH50623.1| 242|Homo sapiens TCEA2 protein protein.
Length = 242
Score = 78.2 bits (184), Expect = 2e-14
Identities = 53/152 (34%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 231 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 374
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 375 XXXXLPASFPPQSNTTDAVRLKCRELLTQALK 470
+FPP T DAVR KCRE+LT AL+
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQ 151
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 73.3 bits (172), Expect = 7e-13
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +3
Query: 417 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 596
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 597 ANLKDPKNPTLRTNFFNG 650
+NLKDP+NP LR N +G
Sbjct: 243 SNLKDPRNPGLRRNVLSG 260
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 231 SKDDEVISLCKTLIKNWKKFLSTP 302
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 73.3 bits (172), Expect = 7e-13
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +3
Query: 417 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 596
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 597 ANLKDPKNPTLRTNFFNG 650
+NLKDP+NP LR N +G
Sbjct: 243 SNLKDPRNPGLRRNVLSG 260
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 231 SKDDEVISLCKTLIKNWKKFLSTP 302
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 73.3 bits (172), Expect = 7e-13
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +3
Query: 417 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 596
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 597 ANLKDPKNPTLRTNFFNG 650
+NLKDP+NP LR N +G
Sbjct: 243 SNLKDPRNPGLRRNVLSG 260
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 231 SKDDEVISLCKTLIKNWKKFLSTP 302
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 73.3 bits (172), Expect = 7e-13
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +3
Query: 417 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 596
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 155 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 214
Query: 597 ANLKDPKNPTLRTNFFNG 650
+NLKDP+NP LR N +G
Sbjct: 215 SNLKDPRNPGLRRNVLSG 232
Score = 54.8 bits (126), Expect = 3e-07
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +3
Query: 168 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTP 302
+++ +L TRIG+ VN +RK D EV+SL K LIKNWK+ L +P
Sbjct: 10 MSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSP 54
>AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.22 protein.
Length = 154
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +3
Query: 51 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 230
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 231 SKDDEVISLCKTLIKNWKKFLSTP 302
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL590548-2|CAI13199.1| 82|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 82
Score = 62.1 bits (144), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 293
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 53
>AJ844627-1|CAH59746.1| 86|Homo sapiens transcription elongation
factor A protein 2 (SII) protein.
Length = 86
Score = 57.2 bits (132), Expect = 5e-08
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = +3
Query: 534 CIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
CI+ NTDM+YKNRVRSR++NLKD KNP LR N G
Sbjct: 6 CIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCG 44
>AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ39713 fis, clone SMINT2013170, weakly similar to
TRANSCRIPTION FACTOR S-II-RELATED PROTEIN 4. ).
Length = 217
Score = 41.9 bits (94), Expect = 0.002
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 420 TDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVA 599
T +R KC ELL AL ++ ++ + +YK +RS+VA
Sbjct: 37 TTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVA 96
Query: 600 NLKDPKNPTLRTNFFNG 650
NLK+P+N L+ N +G
Sbjct: 97 NLKNPRNSHLQQNLLSG 113
>D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein.
Length = 2044
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 537 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+++ F++TD +YKN+ RS + NLKDPKN L G
Sbjct: 971 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKG 1008
>BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 537 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+++ F++TD +YKN+ RS + NLKDPKN L G
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKG 1003
>BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 537 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+++ F++TD +YKN+ RS + NLKDPKN L G
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKG 1003
>AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 537 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+++ F++TD +YKN+ RS + NLKDPKN L G
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKG 1003
>AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 537 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+++ F++TD +YKN+ RS + NLKDPKN L G
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKG 1003
>AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 40.3 bits (90), Expect = 0.006
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 537 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNG 650
+++ F++TD +YKN+ RS + NLKDPKN L G
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKG 1003
>BC035374-1|AAH35374.1| 208|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 177 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 290
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>AL353898-9|CAI22669.1| 208|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 177 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 290
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>AL353898-8|CAI22668.1| 238|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 238
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 177 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 290
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 104 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 140
>AK056674-1|BAB71250.1| 208|Homo sapiens protein ( Homo sapiens
cDNA FLJ32112 fis, clone OCBBF2001586, weakly similar to
TRANSCRIPTION ELONGATION FACTOR S-II. ).
Length = 208
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 177 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 290
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>BC110430-1|AAI10431.1| 600|Homo sapiens mediator complex subunit
26 protein.
Length = 600
Score = 38.7 bits (86), Expect = 0.018
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 168 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 293
I + L +TR+G +N +RK +K++E+ K L+++W+K +
Sbjct: 43 ITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI 84
>AF104253-1|AAD12722.1| 600|Homo sapiens transcriptional
co-activator CRSP70 protein.
Length = 600
Score = 38.7 bits (86), Expect = 0.018
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 168 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 293
I + L +TR+G +N +RK +K++E+ K L+++W+K +
Sbjct: 43 ITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI 84
>L47345-1|AAA75492.1| 772|Homo sapiens elongin A protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.024
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 159 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 293
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>BC002883-1|AAH02883.1| 772|Homo sapiens transcription elongation
factor B (SIII), polypeptide 3 (110kDa, elongin A)
protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.024
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 159 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 293
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>AL031295-2|CAB40157.1| 772|Homo sapiens transcription elongation
factor B (SIII), polypeptide 3 (110kDa, elongin A)
protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.024
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 159 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 293
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>AY481572-1|AAS49899.1| 2240|Homo sapiens death
inducer-obliterator-3 protein.
Length = 2240
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 549 FKNTDMRYKNRVRSRVANLKDPKNPTL 629
F+ TD RYK++ RS + NLKDPKN L
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGL 740
>AY481571-1|AAS49898.1| 1189|Homo sapiens death
inducer-obliterator-2 protein.
Length = 1189
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 549 FKNTDMRYKNRVRSRVANLKDPKNPTL 629
F+ TD RYK++ RS + NLKDPKN L
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGL 740
>AL117379-2|CAM28273.1| 1189|Homo sapiens death inducer-obliterator
1 protein.
Length = 1189
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 549 FKNTDMRYKNRVRSRVANLKDPKNPTL 629
F+ TD RYK++ RS + NLKDPKN L
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGL 740
>AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterator
1 protein.
Length = 2240
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 549 FKNTDMRYKNRVRSRVANLKDPKNPTL 629
F+ TD RYK++ RS + NLKDPKN L
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGL 740
>AL035669-2|CAI95770.2| 1189|Homo sapiens death inducer-obliterator
1 protein.
Length = 1189
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 549 FKNTDMRYKNRVRSRVANLKDPKNPTL 629
F+ TD RYK++ RS + NLKDPKN L
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGL 740
>AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterator
1 protein.
Length = 2240
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 549 FKNTDMRYKNRVRSRVANLKDPKNPTL 629
F+ TD RYK++ RS + NLKDPKN L
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGL 740
>AB002331-1|BAA20791.2| 1223|Homo sapiens KIAA0333 protein.
Length = 1223
Score = 35.1 bits (77), Expect = 0.22
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 549 FKNTDMRYKNRVRSRVANLKDPKNPTL 629
F+ TD RYK++ RS + NLKDPKN L
Sbjct: 748 FQVTDNRYKSKYRSIMFNLKDPKNQGL 774
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BC005267-1|AAH05267.1| 312|Homo sapiens PPP1R10 protein protein.
Length = 312
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase
nuclear targeting subunit protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.6
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 156 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 311
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,308,517
Number of Sequences: 237096
Number of extensions: 1036358
Number of successful extensions: 9219
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 9154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9201
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -