Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0665
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.5  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    22   5.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.6  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 496 ILSLSIKKFYSLFEIQTALFSSASGTLEILHAL 594
           IL  ++  F SLF  QT L +   G+  +LH +
Sbjct: 359 ILGETVDLFNSLFGYQTLLITFHIGSQLVLHTV 391


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 636 WSRPGLVRKKIRKW*CMKYFQCSGCRR 556
           +SRP L++  IR     K F C+ C R
Sbjct: 17  FSRPWLLQGHIRTHTGEKPFSCTYCNR 43


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 620 SPGLDQRN*LNLRFFTAVHESQN 688
           SPG DQR+  + R +  V+E+Q+
Sbjct: 411 SPGSDQRSTPSPRVYGNVNENQD 433


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +2

Query: 83  LILWFVFNSINHLSSFQIFNL 145
           L +W +FN  N   S+  F++
Sbjct: 55  LCIWSIFNKWNQFRSYSNFSV 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,875
Number of Sequences: 336
Number of extensions: 3294
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)