Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0664
         (641 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 588 NSPNLVSPSTSPVVRKATPSGFRQPQP 508
           N PN  +PSTS  V++  P    Q +P
Sbjct: 32  NVPNFAAPSTSTAVQR--PQAILQVRP 56


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
 Frame = +2

Query: 155  DLESIINQIFTSAKP-PTQLHPVTQPSVADRAPSTLVPGVSTNDDLSCQTSDGQEGECVN 331
            D + I+ +     KP PT + P T      + P      V     L        +  C  
Sbjct: 2196 DPKCILGRDNDKTKPKPTTMKPTTTIGYEPQEPVLPAEVVPCQGRLFV----ADDTNCAQ 2251

Query: 332  YYLCN 346
            YYLCN
Sbjct: 2252 YYLCN 2256


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 437 CLAPDQRPPTDPI 475
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 437 CLAPDQRPPTDPI 475
           CLAP  +PP  PI
Sbjct: 29  CLAPIPQPPAYPI 41


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,303
Number of Sequences: 336
Number of extensions: 3180
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)