Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0663
         (612 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2ESA6 Cluster: Putative uncharacterized protein; n=2; ...    35   1.8  
UniRef50_UPI000049887C Cluster: hypothetical protein 172.t00010;...    33   7.1  
UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_UPI0000E4A7EB Cluster: PREDICTED: hypothetical protein;...    32   9.3  

>UniRef50_A2ESA6 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 364

 Score = 34.7 bits (76), Expect = 1.8
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
 Frame = -3

Query: 586 NIHTINETH*IKTDTFIKNNYQ--LNTFQIFHSTDTYFEPTIIDVFN-CTSIKLTPINFS 416
           N+ TIN T     +TF K +    L+  ++  S +  +      +F+ CTS+K+T IN +
Sbjct: 138 NLETINITKMKSNETFSKASVSSVLSARKVLSSNEDVYYTLPEGIFDGCTSLKVTNINMN 197

Query: 415 CYDIFFTFYYLNGCTVAKMSLTPNSL 338
            Y+I  + Y    C     S+ P+S+
Sbjct: 198 IYNI--SSYAFRNCVALSFSI-PSSV 220


>UniRef50_UPI000049887C Cluster: hypothetical protein 172.t00010;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 172.t00010 - Entamoeba histolytica HM-1:IMSS
          Length = 491

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 503 YLKCIQLIIIFNKCICFYLMGFVNCMYVSMILCTHM 610
           YL     II F++ ICF+++G++      MIL T M
Sbjct: 301 YLSVFLGIIYFSQTICFFIIGYIEAWQYKMILSTIM 336


>UniRef50_Q8IK96 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 4638

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 586  NIHTINETH*IKTDTFIKNNYQLNTFQIFHSTDT 485
            N H IN+   I  D  IKNNY  N + ++H+  T
Sbjct: 4315 NNHIINQEKLIYNDNTIKNNYSNNKYNLYHTNYT 4348


>UniRef50_UPI0000E4A7EB Cluster: PREDICTED: hypothetical protein;
           n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 805

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 482 VSIR*MEYLKCIQLIIIFN--KCICFYLMGFVNCMYV 586
           VS R     KC  ++  FN   CICF+ + F NC Y+
Sbjct: 6   VSSRSTAESKCFPVVCFFNCFYCICFFYICFFNCFYL 42


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,992,704
Number of Sequences: 1657284
Number of extensions: 8433266
Number of successful extensions: 15300
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15285
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)