Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0663
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.2  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.0  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.2  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 463 DVFNCTSIKLTPINFSCYDIFFTFYYL 383
           ++FNC S K   +NF+ ++++     L
Sbjct: 103 EIFNCCSKKSFRMNFAIFNLYMVLLLL 129


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 80  FGDRTNYRLYNRRLCPDARLKR 15
           +G+     +Y RR C + RLK+
Sbjct: 226 YGNNCEIDMYMRRKCQECRLKK 247


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 574 LYVCFNDTMYTY 609
           L+VCFN  MY +
Sbjct: 60  LHVCFNSYMYAF 71


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 436 LTPINFSCYDIFFTFYYLNGCTVAKMS 356
           L  I  S +D+ F  YYL      K S
Sbjct: 256 LVSIGVSLFDVLFQAYYLYYVATGKAS 282


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 436 LTPINFSCYDIFFTFYYLNGCTVAKMS 356
           L  I  S +D+ F  YYL      K S
Sbjct: 256 LVSIGVSLFDVLFQAYYLYYVATGKAS 282


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 376  CTVAKMSLTPNSLLTSRQI 320
            CT  K  L+PN+LL  + +
Sbjct: 1366 CTKKKEELSPNALLDKQAV 1384


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 376  CTVAKMSLTPNSLLTSRQI 320
            CT  K  L+PN+LL  + +
Sbjct: 1366 CTKKKEELSPNALLDKQAV 1384


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 376  CTVAKMSLTPNSLLTSRQI 320
            CT  K  L+PN+LL  + +
Sbjct: 1366 CTKKKEELSPNALLDKQAV 1384


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 376  CTVAKMSLTPNSLLTSRQI 320
            CT  K  L+PN+LL  + +
Sbjct: 1366 CTKKKEELSPNALLDKQAV 1384


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +3

Query: 570 LIVCMFQ*YYVHI 608
           L+VC++  YY+H+
Sbjct: 254 LLVCIYYFYYMHL 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,914
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)