Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0663
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.9  
AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450 pr...    23   5.9  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    23   5.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 1   GDTYDRLSRASGHSRRLYNL*LVRSPK 81
           G+T+D L  AS   RRL  L + +S K
Sbjct: 802 GETFDELPTASARPRRLSELSVKKSKK 828


>AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 550 TDTFIKNNYQLNTFQIFHSTDTYFEPT 470
           T  FI NNY+LNT + + S    F P+
Sbjct: 58  TVVFI-NNYELNTSERYWSEPKRFNPS 83


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = -3

Query: 550 TDTFIKNNYQLNTFQIFHSTDTYF----EPTIIDVFNCTSIK 437
           TD  +  N  +  FQ FH   TY+    +P    +FN    K
Sbjct: 26  TDLELVKNVFVKDFQYFHDRGTYYNEKHDPLSAHLFNLEGYK 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,070
Number of Sequences: 2352
Number of extensions: 10092
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)