Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0660
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13) 33 0.15
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_43247| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06) 32 0.45
SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 1.8
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 2.4
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 29 2.4
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 2.4
SB_3897| Best HMM Match : DUF1662 (HMM E-Value=4.4) 29 3.2
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 4.2
SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16) 29 4.2
SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032) 27 9.7
SB_54680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_34090| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_16299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_57436| Best HMM Match : SCP (HMM E-Value=3.9e-13)
Length = 265
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = +3
Query: 201 LAAPLSYH*S-----NTTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDK 365
LA SYH S + T+R + K L +TTG E S T+L + T P TT+
Sbjct: 10 LADGCSYHRSFSSSPDETSRNTSLPKTTSLPETTGLPETTSLPETTSLPETTSLPETTNL 69
Query: 366 TV*VHMPTDTKLPNLRR-SKIASDPETS 446
+P T LP + A+ PET+
Sbjct: 70 PETTSLPETTNLPETTSPPETATPPETT 97
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/88 (27%), Positives = 38/88 (43%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 458
+TTG E S T +++ T P TT + +P T P + S ET+
Sbjct: 2902 ETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAP-----ETTSPTETTAVPG 2956
Query: 459 STRTAKTISSRYVTGQTVTVSTRKTTYL 542
+T KT +S T + T +TT++
Sbjct: 2957 TTAAPKTTASPETTAKPDTTGAAETTFV 2984
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 458
+TTG E S T + + T P TT P T P + S PET+ A
Sbjct: 3040 ETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPETTSAP-----ETTSVPETTSAPE 3094
Query: 459 STRTAKTISSRYVTGQTVTVSTRKTTYL 542
+T +T +S T + T +TT++
Sbjct: 3095 TTALPETTASPETTAKPDTTGAPETTFV 3122
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLP-NLRRSKIASDPETSPAR 455
+TT E S T L + T P TT K P T +P + + + P T+
Sbjct: 3082 ETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVP 3141
Query: 456 ISTRTAKTISSRYVTGQTVTVSTRKTT 536
+T ++T+++ T T + +TT
Sbjct: 3142 GTTAVSETVATPETTAAPETTAVPETT 3168
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 458
+TTG E S T + + T P TT P T P + S PET+ A
Sbjct: 1885 ETTGAPETTSAPKTTAVPEATAAPETTSAPETTAAPETTSAP-----ETTSVPETTSAPE 1939
Query: 459 STRTAKTISSRYVTGQTVTVSTRKTTYL 542
+T +T +S T + T +TT++
Sbjct: 1940 TTALPETTASPETTAKPDTTGAPETTFV 1967
Score = 32.7 bits (71), Expect = 0.26
Identities = 28/96 (29%), Positives = 39/96 (40%), Gaps = 1/96 (1%)
Frame = +3
Query: 267 APLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRR-SKIASDPET 443
A + +TT E S T L K T P TT + P T P K + PET
Sbjct: 2127 AAVPETTSVPETTSAPENTALPKTTALPETTAAPETIAKPETTAPPETTALPKTTTLPET 2186
Query: 444 SPARISTRTAKTISSRYVTGQTVTVSTRKTTYLRSS 551
+ A +T +T + T + T + R TT + S
Sbjct: 2187 TAAPETTAKPETTGAPETTSASDTTAVRGTTAVPES 2222
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRR-SKIASDPETSPAR 455
+TTG E S T +++ T P TT + +P T P ++ + P T+ A
Sbjct: 2359 ETTGAPETTSAPKTTAVQEATASPETTSEPETTALPKTTAAPETTSPTETTAVPGTTAAP 2418
Query: 456 ISTRTAKTISSRYVTGQTVTVSTRKTT 536
+T + +T + TG T + TT
Sbjct: 2419 KTTASPETTAKPDTTGAAETTAVPVTT 2445
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/72 (33%), Positives = 29/72 (40%)
Frame = +3
Query: 321 TTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVT 500
T + K T P TT P T LP KI + PET+ +T +T S T
Sbjct: 2896 TAVPKTTAAPETTPLPKTTAAPETTTLP-----KITAAPETTAVPKTTAAPETTSVPKTT 2950
Query: 501 GQTVTVSTRKTT 536
T S KTT
Sbjct: 2951 AAPETTSVPKTT 2962
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Frame = +3
Query: 282 TTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRS-KIASDPETSPARI 458
TT E + TTL K T+ P TT P T +P + + S P+T+ A
Sbjct: 2703 TTAAPEATAVPETTTLPKTTVAPETTTLPKTTAAPETTAVPKTTAAPETTSVPKTTAAPG 2762
Query: 459 STRTAKTISSRYVTGQTVTVSTRKTT 536
++ KT + T T + +TT
Sbjct: 2763 TSTVPKTTVAAETTSVPKTTAIMETT 2788
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/72 (30%), Positives = 30/72 (41%)
Frame = +3
Query: 321 TTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVT 500
T++ K T P TT P T LP K + PET+P +T +T + T
Sbjct: 2944 TSVPKTTAAPETTSVPKTTAAPETTPLP-----KTTAAPETTPLPKTTAAPETTTLPKTT 2998
Query: 501 GQTVTVSTRKTT 536
T + KTT
Sbjct: 2999 AAPETTTLPKTT 3010
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLP-NLRRSKIASDPETSPAR 455
+TT E S T L + T P TT K P T +P + + + P T+
Sbjct: 1927 ETTSVPETTSAPETTALPETTASPETTAKPDTTGAPETTFVPETIAAPETTTVPGTTAVP 1986
Query: 456 ISTRTAKTISSRYVTGQTVTVSTRKTT 536
+T ++T+++ T T + +TT
Sbjct: 1987 GTTAVSETVATPETTAAPETTAVPETT 2013
Score = 27.9 bits (59), Expect = 7.4
Identities = 32/116 (27%), Positives = 44/116 (37%)
Frame = +3
Query: 189 ILN*LAAPLSYH*SNTTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKT 368
I+ A P+S TT + AP +TT + + T + K T P TT
Sbjct: 2784 IMETTAVPMSNAGPETTAA--PETTAAP--ETTAVPKTTAAPETTAVPKTTAAPETTSVP 2839
Query: 369 V*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVTVSTRKTT 536
P T +P K + PET+ +T +T S T T S KTT
Sbjct: 2840 KTTAAPETTSVP-----KTTAAPETTTLPKTTAAPETTSVPKTTAAPGTTSVPKTT 2890
>SB_43247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 31.9 bits (69), Expect = 0.45
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 194 QLAGRTAVLPLIKYNDPRFRTVEAGPTLGHYWKNGKEIENTEDYVEEVY 340
QLA + + ++ ++ GP LG + KN + N ED V +VY
Sbjct: 281 QLANISQFMMMLSIQTDEMARLKGGPLLGEFVKNMRGFANAEDGVRKVY 329
>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
Length = 587
Score = 31.9 bits (69), Expect = 0.45
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 4/107 (3%)
Frame = +3
Query: 228 SNTTTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTT----DKTV*VHMPTDT 395
S TR F + Q P D T T + TT+ YT +TT T+ ++ T T
Sbjct: 365 SGEETRKF-ECVQVPPTDFTTITTITNYTTTTTITNYTTTVSTTITNYTTTITINNYTTT 423
Query: 396 KLPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVTVSTRKTT 536
+ + T +T TIS+ Y T T+T++T TT
Sbjct: 424 VNTTITTNYTTIVTITITTNYTTIVTITISTNYTTIVTITITTNYTT 470
>SB_53631| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +3
Query: 345 RPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKTISS 488
RP+ T T H P D + P + D +TS R S+ + T+ S
Sbjct: 544 RPSQTPPTSLKHFPGDERTPPTSLKHVPGDEQTSQVRFSSEPSSTLRS 591
>SB_33280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +3
Query: 273 LLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLP-NLRRSKIASDPETSP 449
+++TT TE + I TT K T P T +T T T+ P + + ++ T+
Sbjct: 12 IIETTTTTEEPTTITETTTTKTTEEPTTITETT-----TTTEEPTTITETTTTTEEPTTI 66
Query: 450 ARISTRTAKTISSRYVTGQTVTVSTR 527
I+T T + ++ +T T R
Sbjct: 67 TEITTTTEEPTTTTTTAAETPTTIMR 92
>SB_36350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 314 TEDYVEEVYDASQYHGQDGLGAYAYGYQTPESAKVENR 427
TE + + S YHGQDGLG A G + P+ ++++
Sbjct: 151 TEGLTGDFVELSAYHGQDGLGD-AQGLREPDRTPLKDK 187
>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1211
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/86 (26%), Positives = 36/86 (41%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARI 458
DTT E + + T + T P+TT +P T P + + P+T+ A
Sbjct: 890 DTTAAPETTAALETTAAPETTAAPDTTAAPDTTAVPETTAAP-----ETTATPDTTAATE 944
Query: 459 STRTAKTISSRYVTGQTVTVSTRKTT 536
+T +T + T T ST +TT
Sbjct: 945 TTAAPETTAVPETTAAPETTSTPETT 970
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRS-KIASDPETSPAR 455
+TT E + T + T+ P TT P T P + + PET+ A
Sbjct: 494 ETTKEPETTAAPDTTAAPETTVAPETTIAPETTATPETTAAPETTVAPETTMTPETTAAP 553
Query: 456 ISTRTAKTISSRYVTGQTVTVSTRKTT 536
+T +T ++ T + T + KTT
Sbjct: 554 ETTTAPETTAASETTAASETTAAPKTT 580
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 279 DTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRSKIAS-DPETSPAR 455
+TT E T + TM P TT P T P + + + PET+ A
Sbjct: 514 ETTAAPETTMAPETTAAPETTMAPETTIAPEATVAPETTMAPETTAAPVTTMAPETTAAL 573
Query: 456 ISTRTAKTISSRYVTGQTVTVSTRKTT 536
+T +T ++R T T KTT
Sbjct: 574 ETTMAPETTAARETTVAPETTLAPKTT 600
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/47 (42%), Positives = 21/47 (44%)
Frame = +3
Query: 339 TMRPNTTDKTV*VHMPTDTKLPNLRRSKIASDPETSPARISTRTAKT 479
TM P T P+ T P S I PETSPA IS T KT
Sbjct: 3087 TMAPEATVVPKTTVGPSTTISPKTETS-ITETPETSPATISISTEKT 3132
Score = 28.3 bits (60), Expect = 5.6
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = +3
Query: 276 LDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLR-RSKIASDPETSPA 452
L+TT E T + T+ P TTD P T P + S PET+ A
Sbjct: 1370 LETTATLETTMVPETTASSETTVAPETTDAPATTLAPETTAAPETTWAPETTSAPETTVA 1429
Query: 453 RISTRTAKTISSRYVTGQTVTVSTRKTT 536
T +T ++ +T T + TT
Sbjct: 1430 PEITAATETTAAPDITVAPKTTAAPVTT 1457
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = +3
Query: 321 TTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRRS-KIASDPETSPARISTRTAKTISSRYV 497
T+ TM P TT V P T P + + PET+ A +T +T ++
Sbjct: 3316 TSAPATTMAPETTAAPVTTMAPETTAAPATTAALETTMVPETTAASETTVAPETTDAQAT 3375
Query: 498 TGQTVTVSTRKTT 536
T T + +KTT
Sbjct: 3376 TLAPETTAAQKTT 3388
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 321 TTLKKYTMRPNTTDKTV*VHMP-TDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYV 497
T + T+ P TTD P T T L +K PET+PA +T ++ ++
Sbjct: 217 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 276
Query: 498 TGQTVTVSTRKTT 536
T T +++TT
Sbjct: 277 TVAPETTVSQETT 289
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 384 PTDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYVTGQTVT 515
PT T L+ ++ +S P TSPA T T + +T TVT
Sbjct: 773 PTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSITPTTVT 816
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 321 TTLKKYTMRPNTTDKTV*VHMP-TDTKLPNLRRSKIASDPETSPARISTRTAKTISSRYV 497
T + T+ P TTD P T T L +K PET+PA +T ++ ++
Sbjct: 2279 TAAPETTVAPETTDAPATTLAPKTTTALETTVEAKTTVVPETTPALETTSAPESTAATES 2338
Query: 498 TGQTVTVSTRKTT 536
T T +++TT
Sbjct: 2339 TVAPETTVSQETT 2351
>SB_3897| Best HMM Match : DUF1662 (HMM E-Value=4.4)
Length = 300
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 160 LCFFGLDVNLEDVDAG-FRRRRHNCDHGENRHN 65
LCF + +NLED + G R+R+H + NR N
Sbjct: 266 LCFEAMGMNLEDQNRGRKRKRKHKRNASANRSN 298
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 375 VHMPTDTKLPNLRRSKIAS-DPETSPARISTRTAKTISSRYVTGQTVTVSTRKTTYLRSS 551
VH P+L + ++ P T+ I R+ + SR GQ T+ST KTT +S
Sbjct: 1701 VHSIPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTNRVHSRAQEGQIPTLSTLKTTSTSTS 1760
Query: 552 *NK 560
K
Sbjct: 1761 TTK 1763
>SB_25762| Best HMM Match : VWD (HMM E-Value=2.2e-16)
Length = 705
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 1/94 (1%)
Frame = +3
Query: 237 TTRGFAQLKQAPLLDTTGRTERKSRILRTTLKKYTMRPNTTDKTV*VHMPTDTKLPNLRR 416
TT G +AP TTG T T+ P TT PT T P+
Sbjct: 315 TTTGAPSTTRAP--PTTGAVTTTGAPATTGAPATTVAPTTTGAPTTTGAPTTTGAPSTTE 372
Query: 417 SKIASD-PETSPARISTRTAKTISSRYVTGQTVT 515
+ ++ P T+ A +T T + TG T
Sbjct: 373 APSTTEAPSTTEAPSTTEVPTTSAVPTTTGAPTT 406
>SB_59548| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2835
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = -2
Query: 489 LMRSFLPSL*IYEPVTSPDLTRFSTF----ADSGVWYP*AYAPRPSCPWYWD 346
L R+FLP +Y + +PDLT+ T D + Y + C WYWD
Sbjct: 1550 LRRTFLPYQGLYYVLITPDLTKQQTLLWRSGDLNISYGLGFY-ESGC-WYWD 1599
>SB_8469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 874
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 257 VEAGPTLGHYWKNGKEIENTEDYVEEVYDASQYHGQDGLGAYAYGYQTP 403
VEAG L + + + + +VE AS+ G++GL A A G TP
Sbjct: 229 VEAGRRLAKWNRQNRAKKKAVQHVESPV-ASESQGREGLRARAEGIHTP 276
>SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032)
Length = 807
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 169 KQPTIHRSSISWPHRCLTIDQIQRPEVSHS*SRPHSWT 282
KQ +HR P RCL+ID I + S P S T
Sbjct: 455 KQVPVHRYHSPRPSRCLSIDTILHDQAGACPSIPFSTT 492
>SB_54680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 476 NDLIKVRYWSDRDGFHQEDNLPKVELKQVEEAPDVRAAR-IAHEKAW 613
+D I W DG ED++ L++VE++ V R I + +W
Sbjct: 86 DDSIVTESWDFTDGLEDEDSILLSTLQEVEQSQTVNNIRHITNNASW 132
>SB_34090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 476 NDLIKVRYWSDRDGFHQEDNLPKVELKQVEEAPDVRAAR-IAHEKAW 613
+D I W DG ED++ L++VE++ V R I + +W
Sbjct: 275 DDSIVTESWDFTDGLEDEDSILLSTLQEVEQSQTVNNIRHITNNASW 321
>SB_16299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 6 RNYTVIHRSN*KKKEETCCVLCLFSP 83
R V N +K +CCV C FSP
Sbjct: 125 RKTRVFRSDNSRKMPRSCCVFCEFSP 150
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,980,280
Number of Sequences: 59808
Number of extensions: 437167
Number of successful extensions: 1619
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1598
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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