Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0658
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.9  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 323  GQYVPGMYQSI*YLRCLFHQIR 258
            GQYVP  +    Y RC+  ++R
Sbjct: 1106 GQYVPDPHNCNAYYRCVLGELR 1127


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 393 SIHVGNIQNPQTGTYP 346
           +I + N+QNP TG+ P
Sbjct: 675 NILLKNLQNPSTGSKP 690


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 123 EVDEDYINDKFNLTGLN 173
           ++  DY+NDK+   G++
Sbjct: 29  DIPNDYLNDKYKPLGVS 45


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 378 CPRVYCECQPMLPIGLSDV 434
           C   YCEC  ++ I L  V
Sbjct: 498 CENEYCECTHVVNIPLGTV 516


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = +1

Query: 550 WCSWCTPINDQNDLPLNSYQDY 615
           WCS   P+    +   N Y +Y
Sbjct: 235 WCSSSQPVLSTTNSTTNCYNNY 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,092
Number of Sequences: 336
Number of extensions: 3888
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)