Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0657
         (509 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   2.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   3.7  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    21   6.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   8.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.4  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +2

Query: 158 GGKSSNGGHGWVQGAWGVL 214
           GG ++NG  G   G WG L
Sbjct: 187 GGNNNNGTPGGHSGFWGQL 205


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = -3

Query: 162 PPHLASLARQMYIVLTYLYCVYRLRTIITNQSSRNRSMKLNNSETVS 22
           P HL S+ARQ+ + + +L    + R +  + ++RN  +  N++  VS
Sbjct: 591 PKHLLSIARQVALGMEHL---AKTRVVHRDLAARNVLVCENHTVKVS 634


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 234 VVSPPGWRTPHAPCTHPWPP 175
           ++SP G  TP+   T P+PP
Sbjct: 57  LLSPSG-NTPNKSSTSPYPP 75


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 5/12 (41%), Positives = 12/12 (100%)
 Frame = +3

Query: 471 LVPVYLFIYLYH 506
           L+P+YLF+++++
Sbjct: 5   LIPLYLFLFVHY 16


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 270 GGGPHYVEGIG 302
           GGGP +  G+G
Sbjct: 69  GGGPRFSSGVG 79


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 270 GGGPHYVEGIG 302
           GGGP +  G+G
Sbjct: 69  GGGPRFSSGVG 79


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 279 VLRLPHPTTSRRAH*VVSP 223
           V+ LP PT+S   H +V+P
Sbjct: 247 VVGLPAPTSSIMMHHLVNP 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,612
Number of Sequences: 336
Number of extensions: 2827
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12154132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)