Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0657
         (509 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    26   0.85 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.1  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   4.5  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   4.5  
L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase pro...    23   7.9  
AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase p...    23   7.9  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.8 bits (54), Expect = 0.85
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = +1

Query: 109 QVCKDNIHLSSQRRQVGGKVLEWRPRMGTR 198
           Q+ KD +  S++  ++GG+++ W P + +R
Sbjct: 350 QMYKDLLQFSARHLKLGGRLVCWFPMLSSR 379


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2

Query: 328 LPTAGHRPSPMPST*CGPPPS 266
           LP A   P+P P    GPPPS
Sbjct: 576 LPNAQPPPAPPPPPPMGPPPS 596



 Score = 22.6 bits (46), Expect = 7.9
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -2

Query: 277 PPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPP 155
           PPP      PP  L+    G     R   P++    G +PP
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
 Frame = -2

Query: 325 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIR-GLSPPP 152
           P   H P   PS    PP S S         R      +  +  +P   +IR  +SP P
Sbjct: 107 PHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHPQSPAIREPISPGP 165


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
 Frame = -2

Query: 325 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIR-GLSPPP 152
           P   H P   PS    PP S S         R      +  +  +P   +IR  +SP P
Sbjct: 107 PHHQHHPQQQPSPQTSPPASISFSITNILSDRFGKATAEQQQQPHPQSPAIREPISPGP 165


>L76038-1|AAC27383.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 146 RWLDRCILSLHTCIVFTD*GL*SPINHQE-IDQ*NLIIQ 33
           RW+DR   ++H   V  + G   P++ Q+ ID    II+
Sbjct: 311 RWIDRIYEAIHQGFVVDESGNRIPLDEQKGIDHLGNIIE 349


>AF031626-1|AAD01936.1|  683|Anopheles gambiae prophenoloxidase
           protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 146 RWLDRCILSLHTCIVFTD*GL*SPINHQE-IDQ*NLIIQ 33
           RW+DR   ++H   V  + G   P++ Q+ ID    II+
Sbjct: 311 RWIDRIYEAIHQGFVVDESGNRIPLDEQKGIDHLGNIIE 349


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,789
Number of Sequences: 2352
Number of extensions: 12371
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)