Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0657
(509 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical ... 42 2e-04
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 40 8e-04
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 40 8e-04
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 40 0.001
Z29094-8|CAA82337.1| 254|Caenorhabditis elegans Hypothetical pr... 35 0.030
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.28
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.28
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.28
Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.64
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.64
Z81128-9|CAC42344.1| 239|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical pr... 30 1.1
U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein. 30 1.1
U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein. 30 1.1
AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell... 30 1.1
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical p... 29 2.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 2.0
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 29 2.6
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 3.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 3.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 3.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 3.4
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical ... 28 4.5
AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormo... 27 6.0
>AC103567-9|AAL35735.1| 204|Caenorhabditis elegans Hypothetical
protein Y51F10.8 protein.
Length = 204
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Frame = +1
Query: 172 EWRPRMGTRSVGRPPTRWTDDLVRTAGSR---------WMRKAEDRIMWKALGKAYVQQW 324
+W PR R VGRPP RW D L + +R W +A+DR WKA+ +A ++
Sbjct: 143 DWCPRDEKRPVGRPPMRWNDSLRKEVTTRDAFGQVKQLWSTQAKDRKAWKAVIRAAGEER 202
Query: 325 AD 330
D
Sbjct: 203 ID 204
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Frame = +1
Query: 172 EWRPRMGTRSVGRPPTRWTDDLVRTAGSR---------WMRKAEDRIMWKAL 300
EWRP R VGRPP RWTD L + +R W A+DR W A+
Sbjct: 1007 EWRPYGWKRPVGRPPMRWTDSLRKEITTRDADGEVITPWSTIAKDRKQWLAV 1058
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Frame = +1
Query: 172 EWRPRMGTRSVGRPPTRWTDDLVRTAGSR---------WMRKAEDRIMWKAL 300
EWRP R VGRPP RWTD L + +R W A+DR W A+
Sbjct: 746 EWRPYGWKRPVGRPPMRWTDSLRKEITTRDADGEVITPWSTIAKDRKQWLAV 797
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Frame = +1
Query: 172 EWRPRMGTRSVGRPPTRWTDDLVRTAGSR---------WMRKAEDRIMWKAL 300
EWRP R VGRPP RWTD L + +R W A+DR W A+
Sbjct: 832 EWRPYGWKRPVGRPPMRWTDSLRKEITTRDADGEVITPWSTIAKDRKEWLAV 883
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 9/52 (17%)
Frame = +1
Query: 172 EWRPRMGTRSVGRPPTRWTDDLVRTAGSR---------WMRKAEDRIMWKAL 300
EWRP R VGRPP RWTD L + +R W A+DR W A+
Sbjct: 358 EWRPYGWKRPVGRPPMRWTDSLRKEITTRDADGEVITPWSTIAKDRKEWLAV 409
>Z29094-8|CAA82337.1| 254|Caenorhabditis elegans Hypothetical
protein C07A9.10 protein.
Length = 254
Score = 35.1 bits (77), Expect = 0.030
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 9/44 (20%)
Frame = +1
Query: 196 RSVGRPPTRWTDDLVRTAGSR---------WMRKAEDRIMWKAL 300
R VG+PP RWTD L + +R W +A+DR WKA+
Sbjct: 15 RPVGKPPMRWTDSLRKEITTRDMGNNIITPWSTQAKDRKAWKAV 58
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = -2
Query: 328 LPTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPG 149
+ T G +P P+P + P PS + P A + P P G+ PPPG
Sbjct: 741 MSTLGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
Query: 148 V-AGSTDVYCPYI 113
G +Y P I
Sbjct: 801 APGGGGGMYPPLI 813
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = -2
Query: 328 LPTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPG 149
+ T G +P P+P + P PS + P A + P P G+ PPPG
Sbjct: 741 MSTLGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
Query: 148 V-AGSTDVYCPYI 113
G +Y P I
Sbjct: 801 APGGGGGMYPPLI 813
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = -2
Query: 328 LPTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPG 149
+ T G +P P+P + P PS + P A + P P G+ PPPG
Sbjct: 741 MSTLGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
Query: 148 V-AGSTDVYCPYI 113
G +Y P I
Sbjct: 801 APGGGGGMYPPLI 813
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.28
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = -2
Query: 328 LPTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPG 149
+ T G +P P+P + P PS + P A + P P G+ PPPG
Sbjct: 741 MSTLGDQPPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
Query: 148 V-AGSTDVYCPYI 113
G +Y P I
Sbjct: 801 APGGGGGMYPPLI 813
>Z68107-1|CAA92132.1| 264|Caenorhabditis elegans Hypothetical
protein F48C5.1 protein.
Length = 264
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = -3
Query: 180 PPFEDFPPHLASLARQMYIVLTYLYCVYRLRTIITNQSSRNRSMKLNNSETVSR 19
PP + P + +L + I++ YC+Y+ + + S+ + +NN+ T+S+
Sbjct: 183 PPVCAYWPPVVTLLVFIVIIVLLAYCLYKFKVRNPHHYSKYSTTTINNNNTISK 236
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 0.64
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 307 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 152
P P P + GPP PP R G+ P YPS G+ PPP
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPP 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 0.64
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 307 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 152
P P P + GPP PP R G+ P YPS G+ PPP
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP--GMYPPP 376
>Z81128-9|CAC42344.1| 239|Caenorhabditis elegans Hypothetical
protein T23D8.9b protein.
Length = 239
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -2
Query: 328 LPTAGHRPSPMPS-T*CGPPPSASNDFPPCALS--RQSTGLEDAPRSLYPSVASIRGLSP 158
LPT + P P+ PPPS P ALS +Q + R LY S + RG +
Sbjct: 42 LPTPPYHPQQHPNYISMQPPPSQQQQMTPQALSTQQQQQVQQQQQRQLYSSPSPSRGPAA 101
Query: 157 P 155
P
Sbjct: 102 P 102
>Z81128-8|CAB03402.1| 811|Caenorhabditis elegans Hypothetical
protein T23D8.9a protein.
Length = 811
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -2
Query: 328 LPTAGHRPSPMPS-T*CGPPPSASNDFPPCALS--RQSTGLEDAPRSLYPSVASIRGLSP 158
LPT + P P+ PPPS P ALS +Q + R LY S + RG +
Sbjct: 42 LPTPPYHPQQHPNYISMQPPPSQQQQMTPQALSTQQQQQVQQQQQRQLYSSPSPSRGPAA 101
Query: 157 P 155
P
Sbjct: 102 P 102
>U38937-1|AAA93079.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 307 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 152
PSP S C P S ++ P S + RSL PS S PPP
Sbjct: 223 PSPTDSV-CSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPP 273
>U38935-1|AAB60254.1| 441|Caenorhabditis elegans LIN-1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 307 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 152
PSP S C P S ++ P S + RSL PS S PPP
Sbjct: 223 PSPTDSV-CSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPP 273
>AF067606-1|AAC17530.3| 441|Caenorhabditis elegans Abnormal cell
lineage protein 1 protein.
Length = 441
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/52 (34%), Positives = 21/52 (40%)
Frame = -2
Query: 307 PSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPP 152
PSP S C P S ++ P S + RSL PS S PPP
Sbjct: 223 PSPTDSV-CSPSSSVASSATPSTSSPVDESRQCRKRSLSPSTTSSTTAPPPP 273
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.5 bits (63), Expect = 1.5
Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Frame = -2
Query: 307 PSPMPST*CGPPPSASNDF---PPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVAGS 137
PSP+P+ C PPP+ + PP + AP P + PPP A +
Sbjct: 102 PSPVPAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAAAMPPPPSAPA 161
Query: 136 TDVYCPYILVLCLQ 95
V P C Q
Sbjct: 162 CCVAAPVPTNPCCQ 175
>Z78415-10|CAB01676.2| 341|Caenorhabditis elegans Hypothetical
protein C17G1.7 protein.
Length = 341
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 258 LDAEGGGPHYVEGIGEGLCPAV 323
L GPH ++GIG G PAV
Sbjct: 215 LSGRPAGPHKIQGIGAGFAPAV 236
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 328 LPTAGHRPSPMPST*CGPPPSASNDFPP 245
+P A P PMP C PPP F P
Sbjct: 39 MPCAAPMPMPMPMPVCPPPPPCPAQFCP 66
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = +2
Query: 149 ARWGG-KSSNGGHGWVQGAWG 208
+RWGG + GG GW G WG
Sbjct: 710 SRWGGGRGGWGGGGWGGGGWG 730
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = -2
Query: 325 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGV 146
P AG P P + PPP+ S PP S P P + G PPP
Sbjct: 259 PAAGSPPPPRTGS-PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 145 AGS 137
GS
Sbjct: 318 GGS 320
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = -2
Query: 325 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGV 146
P AG P P + PPP+ S PP S P P + G PPP
Sbjct: 280 PAAGSPPPPRTGS-PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 145 AGS 137
GS
Sbjct: 339 GGS 341
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/63 (31%), Positives = 23/63 (36%)
Frame = -2
Query: 325 PTAGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGV 146
P AG P P + PPP+ S PP S P P + G PPP
Sbjct: 265 PAAGSPPPPRTGS-PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 145 AGS 137
GS
Sbjct: 324 GGS 326
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = -2
Query: 277 PPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVAG 140
PPP A P R+ST +D PR P V+SI PPP +AG
Sbjct: 511 PPPPAPG---PHKEQRRSTS-KDPPRPAPPPVSSI---PPPPPIAG 549
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 27.9 bits (59), Expect = 4.5
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -2
Query: 319 AGHRPSPMPST*CGPPPSASNDFPPCALSRQSTGLEDAPRSLYPSVASIRGLSPPPGVAG 140
+G P+PMP + G PP A P R TG+ P + V +GL PP G
Sbjct: 120 SGGPPAPMPVSRAGGPPRA----PTSMGGRPMTGMARPPTAGLRPVTQ-QGLRAPPSRMG 174
Query: 139 S 137
+
Sbjct: 175 T 175
>AF100656-5|AAF99963.2| 259|Caenorhabditis elegans Hypothetical
protein F49F1.6 protein.
Length = 259
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/66 (27%), Positives = 27/66 (40%)
Frame = -3
Query: 309 GLPQCLPHNAVLRLPHPTTSRRAH*VVSPPGWRTPHAPCTHPWPPFEDFPPHLASLARQM 130
G+P + +L PTT+ P T P T P PP +D P+ A A+
Sbjct: 179 GVP--MAQTTLLTTVKPTTTVVPSTTTKLPATTTKKLPSTTPKPPCKDSSPNCAGWAKNG 236
Query: 129 YIVLTY 112
+ T+
Sbjct: 237 FCTNTF 242
>AF022983-3|AAB69942.2| 399|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 270 protein.
Length = 399
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 163 SPPPGVAGSTDVYCPYILVLCLQIEDYNHQSI 68
SPPP V D+ P +++ QIE++ QS+
Sbjct: 148 SPPPYVDVPKDLLGPCVILQTRQIEEHKEQSV 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,967,075
Number of Sequences: 27780
Number of extensions: 279153
Number of successful extensions: 1026
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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