Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0655
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   3.8  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    22   3.8  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   3.8  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.8  

>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 240 NFNKFLNEMLYYN 278
           N+NK++  +LYYN
Sbjct: 343 NWNKYIPAILYYN 355


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 240 NFNKFLNEMLYYN 278
           N+NK++  +LYYN
Sbjct: 343 NWNKYIPAILYYN 355


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 240 NFNKFLNEMLYYN 278
           N+NK++  +LYYN
Sbjct: 343 NWNKYIPAILYYN 355


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 565 AGDCTSGNISLSLSRFRI 618
           +GD TS   S+ LS FR+
Sbjct: 20  SGDSTSSATSIDLSTFRV 37


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 565 AGDCTSGNISLSLSRFRI 618
           +GD TS   S+ LS FR+
Sbjct: 20  SGDSTSSATSIDLSTFRV 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,472
Number of Sequences: 336
Number of extensions: 2207
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)