Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0654
(718 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 227 6e-60
At4g35090.1 68417.m04984 catalase 2 identical to catalase 2 SP:P... 221 5e-58
At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to c... 203 8e-53
At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to c... 203 8e-53
At3g14205.1 68416.m01795 phosphoinositide phosphatase family pro... 31 0.76
At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family pr... 30 1.8
At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family pr... 29 4.1
At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to R... 29 4.1
At4g00640.1 68417.m00088 hypothetical protein 28 7.1
At3g59230.1 68416.m06603 F-box family protein contains F-box dom... 28 7.1
At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family... 28 7.1
At1g17030.1 68414.m02069 expressed protein 28 7.1
At4g03000.2 68417.m00408 expressed protein contains similarity t... 27 9.4
At4g03000.1 68417.m00407 expressed protein contains similarity t... 27 9.4
At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)... 27 9.4
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 27 9.4
At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ... 27 9.4
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 227 bits (555), Expect = 6e-60
Identities = 106/193 (54%), Positives = 136/193 (70%)
Frame = +3
Query: 138 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 317
DSP F TT SGAPV + TVG GP LL+D + L+++++FDRERIPERVVHA+GA A
Sbjct: 13 DSP-FFTTNSGAPVWNNNSSLTVGTRGPILLEDYHLLEKLANFDRERIPERVVHARGASA 71
Query: 318 FGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDG 497
G+FEVTHDIT+ ++A G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +G
Sbjct: 72 KGFFEVTHDITQLTSADFLRGPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREG 131
Query: 498 VWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLFG 677
+DLVGNN P+FF+RD FP +H K NP +H+++ DF + PE++H +LF
Sbjct: 132 NFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLHMFSFLFD 191
Query: 678 DRGIPDGYRHMNG 716
D GIP YRHM G
Sbjct: 192 DLGIPQDYRHMEG 204
>At4g35090.1 68417.m04984 catalase 2 identical to catalase 2
SP:P25819, GI:17865693 from [Arabidopsis thaliana]
Length = 492
Score = 221 bits (539), Expect = 5e-58
Identities = 103/193 (53%), Positives = 136/193 (70%)
Frame = +3
Query: 138 DSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVHAKGAGA 317
+SP F TT SGAPV + TVG GP LL+D + ++++++FDRERIPERVVHA+GA A
Sbjct: 13 NSP-FFTTNSGAPVWNNNSSMTVGPRGPILLEDYHLVEKLANFDRERIPERVVHARGASA 71
Query: 318 FGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDG 497
G+FEVTHDI+ + A + G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +G
Sbjct: 72 KGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREG 131
Query: 498 VWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQLLYLFG 677
+DLVGNN P+FFIRD FP +H K NP +H+++ DF + PE+++ +LF
Sbjct: 132 NFDLVGNNFPVFFIRDGMKFPDMVHALKPNPKSHIQENWRILDFFSHHPESLNMFTFLFD 191
Query: 678 DRGIPDGYRHMNG 716
D GIP YRHM+G
Sbjct: 192 DIGIPQDYRHMDG 204
>At1g20620.2 68414.m02577 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 427
Score = 203 bits (496), Expect = 8e-53
Identities = 95/199 (47%), Positives = 133/199 (66%)
Frame = +3
Query: 120 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 299
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 300 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 479
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD RGFAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 480 FYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQ 659
FYT +G +DLVGNNTP+FFIRD FP +H K NP T++++ D+++ PE++
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLT 185
Query: 660 LLYLFGDRGIPDGYRHMNG 716
++F D GIP YRHM G
Sbjct: 186 WCWMFDDVGIPQDYRHMEG 204
>At1g20620.1 68414.m02578 catalase 3 (SEN2) almost identical to
catalase 3 SP:Q42547, GI:3123188 from [Arabidopsis
thaliana]; identical to catalase 3 (SEN2) mRNA, partial
cds GI:3158369
Length = 492
Score = 203 bits (496), Expect = 8e-53
Identities = 95/199 (47%), Positives = 133/199 (66%)
Frame = +3
Query: 120 YKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDRERIPERVVH 299
Y+ + + F TT GAPV + T+G+ GP LL+D + ++++++F RERIPERVVH
Sbjct: 6 YRPSSAYNAPFYTTNGGAPVSNNISSLTIGERGPVLLEDYHLIEKVANFTRERIPERVVH 65
Query: 300 AKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAVK 479
A+G A G+FEVTHDI+ + A + G +TP+ VRFSTV E S +T+RD RGFAVK
Sbjct: 66 ARGISAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVVHERASPETMRDIRGFAVK 125
Query: 480 FYTDDGVWDLVGNNTPIFFIRDPTLFPSFIHTQKRNPATHLKDPDMFWDFLTLRPETIHQ 659
FYT +G +DLVGNNTP+FFIRD FP +H K NP T++++ D+++ PE++
Sbjct: 126 FYTREGNFDLVGNNTPVFFIRDGIQFPDVVHALKPNPKTNIQEYWRILDYMSHLPESLLT 185
Query: 660 LLYLFGDRGIPDGYRHMNG 716
++F D GIP YRHM G
Sbjct: 186 WCWMFDDVGIPQDYRHMEG 204
>At3g14205.1 68416.m01795 phosphoinositide phosphatase family
protein contains similarity to phosphoinositide
phosphatase SAC1 [Rattus norvegicus]
gi|11095248|gb|AAG29810; contains Pfam domain, PF02383:
SacI homology domain; identical to SAC domain protein 2
(SAC2) GI:31415720
Length = 808
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 498 LHHQYRTLQQNLEGHEQYQQIHSLHQ-LLRI*QQSVSFCLWTQIL 367
+H R L N+EGH Y+ + ++ L R + +V C+WT L
Sbjct: 176 MHTLQRNLSNNVEGHTYYESMFVWNEYLTRRIRNNVKDCMWTVAL 220
>At3g59480.1 68416.m06636 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 326
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 129 TLKDSPGFITTKSGAPVGIKTAIQTVG 209
+L D+PGFI GAP + AI +G
Sbjct: 29 SLADAPGFIKAPGGAPANVAIAISRLG 55
>At1g06020.1 68414.m00630 pfkB-type carbohydrate kinase family
protein similar to fructokinase GI:2102693 from
[Lycopersicon esculentum]
Length = 345
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 129 TLKDSPGFITTKSGAPVGIKTAIQTVG 209
+L +SPGF+ GAP + A+ +G
Sbjct: 29 SLSESPGFLKAPGGAPANVAIAVSRLG 55
>At1g05460.1 68414.m00555 RNA helicase SDE3 (SDE3) identical to RNA
helicase SDE3 [Arabidopsis thaliana] GI:13811296
Length = 1002
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 167 WSSCWNQNGDTNGGQEWS 220
WS WN NG T EWS
Sbjct: 868 WSDGWNNNGGTKEKNEWS 885
>At4g00640.1 68417.m00088 hypothetical protein
Length = 425
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 7/93 (7%)
Frame = +3
Query: 279 IPERVVHAK----GAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVG---GESG 437
+P R++ AK G G +++ D SA + ++ R+ + + G G
Sbjct: 24 LPNRMISAKLCPKGLGGTRFWDPMIDSKVRSAIRSKRNVSYRSSLTLNADFNGRFYGHLL 83
Query: 438 SADTVRDPRGFAVKFYTDDGVWDLVGNNTPIFF 536
A P GF + + D V DLVGN+ + F
Sbjct: 84 PAKPQNVPLGFRLLCQSSDSVGDLVGNDRNLEF 116
>At3g59230.1 68416.m06603 F-box family protein contains F-box domain
Pfam:PF00646
Length = 491
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -2
Query: 543 LL*RKWEYYFQLNPTLHHQYRTLQQNLEGHEQYQQIHS 430
LL RKW Y+F P L Q G+++ +IH+
Sbjct: 39 LLSRKWRYFFAFVPNLDFDDPVRMQPDMGNQEETEIHT 76
>At1g48120.1 68414.m05370 calcineurin-like phosphoesterase family
protein contains Pfam profile: PF00149 calcineurin-like
phosphoesterase
Length = 1338
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 651 IHQLLYLFGDRGIPDGYR 704
+H LLYL D G PDG R
Sbjct: 663 LHDLLYLMQDAGFPDGDR 680
>At1g17030.1 68414.m02069 expressed protein
Length = 502
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 504 PTLHHQYRTLQQNLEGH 454
P++HH+Y +L N EGH
Sbjct: 190 PSMHHEYTSLVDNEEGH 206
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 316 APAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMK 149
APAP+A +SG K +S++ A P+ T + + IP D +++K
Sbjct: 417 APAPVASEKKSGSEPEEKPSVSTKPAPDYYAAIPYDAT--LGIYIPRNKRDELILK 470
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 316 APAPLACTTRSGIRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGAPDLVVMK 149
APAP+A +SG K +S++ A P+ T + + IP D +++K
Sbjct: 417 APAPVASEKKSGSEPEEKPSVSTKPAPDYYAAIPYDAT--LGIYIPRNKRDELILK 470
>At2g46830.2 68415.m05844 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 526
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 280 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 170
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 119 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 155
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 280 IRSLSKDDISSRKLTSCNKAGPFLPTVCIAVLIPTGA 170
+R S D++++ L + N+ GP + I VL+P G+
Sbjct: 201 VRKESNSDLNAKSLENGNEQGPQTYPMHIPVLVPLGS 237
>At1g06070.1 68414.m00636 bZIP transcription factor, putative
(bZIP69) similar to transcriptional activator RF2a
GB:AF005492 GI:2253277 from [Oryza sativa]; contains
Pfam profile PF00170: bZIP transcription factor
Length = 423
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 492 HQYRTLQQNLEGHEQYQQIHSLHQLLRI*QQ 400
HQ + QQ + H Q QQ++ L Q R+ QQ
Sbjct: 359 HQQQQQQQQQQFHFQQQQLYQLQQQQRLQQQ 389
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,073,418
Number of Sequences: 28952
Number of extensions: 376624
Number of successful extensions: 1038
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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