Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0653
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.86 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.86 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    22   6.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.0  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -2

Query: 165 SVEKHTV--LNETPIGNTITDFTIYYYPIFVISAIHCRL 55
           S E+H    L+ TP    ++    +Y P  V+  I+CRL
Sbjct: 177 SKEEHPTCALDLTPTYAVVSSSISFYVPCIVMLGIYCRL 215


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 288 NGDSFDLRANFSVC 247
           NGD +DL+ N  VC
Sbjct: 426 NGDQYDLKKNLKVC 439


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 412 CSRCTYCRHDVHSLQKPLQQ 471
           C+ CTY     HSL+  L++
Sbjct: 47  CANCTYATKYCHSLKLHLRK 66


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 242 LHDNRKSVSLVTFFLSYRALVIAVSLQWKST 150
           LH N    S+ +F      + ++ SLQW ST
Sbjct: 470 LH-NSSPFSIYSFLERLNLIFMSSSLQWSST 499


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -3

Query: 242 LHDNRKSVSLVTFFLSYRALVIAVSLQWKST 150
           LH N    S+ +F      + ++ SLQW ST
Sbjct: 508 LH-NSSPFSIYSFLERLNLIFMSSSLQWSST 537


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,840
Number of Sequences: 438
Number of extensions: 3029
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)