Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0650
         (663 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5 prot...    98   2e-20
AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein...    98   2e-20
AB065496-1|BAC05747.1|  309|Homo sapiens seven transmembrane hel...    31   4.9  

>BC006405-1|AAH06405.1|  123|Homo sapiens thioredoxin-like 5
           protein.
          Length = 123

 Score = 98.3 bits (234), Expect = 2e-20
 Identities = 44/98 (44%), Positives = 61/98 (62%)
 Frame = +3

Query: 183 FFTFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGDREYWKDKECPFRTD 362
           F  F+GSK   G SWCPDCV+AEPVVR  L  + +  +F+Y  VG++ YWKD    FR  
Sbjct: 28  FAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR-- 85

Query: 363 SRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFEEE 476
              K+  +PTL+K+   Q+L  S+C    L++MLF E+
Sbjct: 86  KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFSED 123


>AJ344101-1|CAC51435.1|  123|Homo sapiens putative 42-9-9 protein
           protein.
          Length = 123

 Score = 98.3 bits (234), Expect = 2e-20
 Identities = 44/98 (44%), Positives = 61/98 (62%)
 Frame = +3

Query: 183 FFTFSGSKLPDGNSWCPDCVEAEPVVRHYLSELDKSIIFVYVDVGDREYWKDKECPFRTD 362
           F  F+GSK   G SWCPDCV+AEPVVR  L  + +  +F+Y  VG++ YWKD    FR  
Sbjct: 28  FAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR-- 85

Query: 363 SRSKLMVIPTLIKWKGVQRLEGSQCSNRELLQMLFEEE 476
              K+  +PTL+K+   Q+L  S+C    L++MLF E+
Sbjct: 86  KNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFSED 123


>AB065496-1|BAC05747.1|  309|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 309

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = -2

Query: 572 FMVDNIIYSYVIVGNLSIRICLKRIGDFSYLIFFFEQHLQKFPIAALASLKP 417
           F+V  +IY   I+GN  I + +     F  L +FF QHL    I   +++ P
Sbjct: 28  FIVFLLIYVTSIMGNSGIILLINTDSRFQTLTYFFLQHLAFVDICYTSAITP 79


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,907,413
Number of Sequences: 237096
Number of extensions: 1674661
Number of successful extensions: 3594
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3592
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)