Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0649
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.7  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -2

Query: 340 CICITYSMKSVEKLFKIYFIIKVYYHTTFH*TRVHILL 227
           C+ IT+++  +  L   YF + + ++  F    VH LL
Sbjct: 61  CVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLL 98



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -2

Query: 367 IVGTKRLLLCICITYSMKSVEKLFKIYFIIKVYYHTTFH*TRVHILLPEKTVY 209
           I+ T  LL  +CI Y   ++  L  IY+  + +     H      L P K+ +
Sbjct: 273 IIFTMHLLFLLCIYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTF 325



 Score = 22.2 bits (45), Expect = 3.6
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 367 IVGTKRLLLCICITYSMKSVEKLFKIYFIIKVYYHTTFH 251
           I+ T  LL  +CI Y +  +  L  IY+    +   T H
Sbjct: 121 IIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVH 159


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/27 (25%), Positives = 18/27 (66%)
 Frame = -2

Query: 169 ELIILCGVFAVVFLSLNMWLSVLEYCH 89
           ++ I C +F V+ L ++ +L+ + +C+
Sbjct: 131 QIFITCELFFVILLWISFFLNFMLHCN 157


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/23 (26%), Positives = 10/23 (43%)
 Frame = -1

Query: 173 WGINYSLWSFRCSIPFFKYVVKC 105
           W +N  +W +     FF+    C
Sbjct: 403 WSVNAGMWMWLSCSSFFQQFFHC 425


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,517
Number of Sequences: 336
Number of extensions: 3243
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)