Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0645
         (575 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022556-1|AAY54972.1|  438|Drosophila melanogaster IP11886p pro...    36   0.052
AE014297-579|AAF54047.1|  438|Drosophila melanogaster CG14606-PA...    36   0.052
AY118796-1|AAM50656.1|  491|Drosophila melanogaster GH17672p pro...    31   0.85 
AE014297-375|AAN14329.1|  491|Drosophila melanogaster CG1213-PC,...    31   0.85 
AE014297-374|AAF51942.1|  491|Drosophila melanogaster CG1213-PB,...    31   0.85 
AE014297-373|AAF51941.1|  491|Drosophila melanogaster CG1213-PA,...    31   0.85 
BT016038-1|AAV36923.1|  855|Drosophila melanogaster RE01051p pro...    30   2.6  
AE013599-1349|AAF58616.2|  855|Drosophila melanogaster CG8271-PA...    30   2.6  

>BT022556-1|AAY54972.1|  438|Drosophila melanogaster IP11886p
           protein.
          Length = 438

 Score = 35.5 bits (78), Expect = 0.052
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 425 GWPSPTLLYLESEESSI--PTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           GW SP+L  L S+ES +  P T  Q SW+ S++ L S    I    L D+ G
Sbjct: 10  GWLSPSLRLLASDESPLGDPLTITQASWVGSLIGLGSLTGNIIFGLLLDRLG 61


>AE014297-579|AAF54047.1|  438|Drosophila melanogaster CG14606-PA
           protein.
          Length = 438

 Score = 35.5 bits (78), Expect = 0.052
 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 425 GWPSPTLLYLESEESSI--PTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           GW SP+L  L S+ES +  P T  Q SW+ S++ L S    I    L D+ G
Sbjct: 10  GWLSPSLRLLASDESPLGDPLTITQASWVGSLIGLGSLTGNIIFGLLLDRLG 61


>AY118796-1|AAM50656.1|  491|Drosophila melanogaster GH17672p
           protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = +2

Query: 425 GWPSPTLLYLESEESSI-----PTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           GW SP    L+SE++S      P T+ + +WI S++ + + + P  +  +AD+ G
Sbjct: 61  GWTSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIG 115


>AE014297-375|AAN14329.1|  491|Drosophila melanogaster CG1213-PC,
           isoform C protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = +2

Query: 425 GWPSPTLLYLESEESSI-----PTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           GW SP    L+SE++S      P T+ + +WI S++ + + + P  +  +AD+ G
Sbjct: 61  GWTSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIG 115


>AE014297-374|AAF51942.1|  491|Drosophila melanogaster CG1213-PB,
           isoform B protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = +2

Query: 425 GWPSPTLLYLESEESSI-----PTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           GW SP    L+SE++S      P T+ + +WI S++ + + + P  +  +AD+ G
Sbjct: 61  GWTSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIG 115


>AE014297-373|AAF51941.1|  491|Drosophila melanogaster CG1213-PA,
           isoform A protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
 Frame = +2

Query: 425 GWPSPTLLYLESEESSI-----PTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           GW SP    L+SE++S      P T+ + +WI S++ + + + P  +  +AD+ G
Sbjct: 61  GWTSPIGPKLKSEDTSDSPLSRPITSDEDAWISSLIAVGALVAPFVAGPMADRIG 115


>BT016038-1|AAV36923.1|  855|Drosophila melanogaster RE01051p
           protein.
          Length = 855

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 443 LLYLESEESSIPTTAYQGSWIVSIM-ILCSALTPIPSAYLADKF 571
           +LY+E  E+   +TA   SWI +I+  LC  L P+ SA L  +F
Sbjct: 254 VLYVEIMETFPSSTATVASWIPAILSALCLVLAPLSSA-LCQRF 296


>AE013599-1349|AAF58616.2|  855|Drosophila melanogaster CG8271-PA
           protein.
          Length = 855

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 443 LLYLESEESSIPTTAYQGSWIVSIM-ILCSALTPIPSAYLADKF 571
           +LY+E  E+   +TA   SWI +I+  LC  L P+ SA L  +F
Sbjct: 254 VLYVEIMETFPSSTATVASWIPAILSALCLVLAPLSSA-LCQRF 296


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,263,741
Number of Sequences: 53049
Number of extensions: 375231
Number of successful extensions: 919
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)