Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0645
         (575 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g16750.1 68415.m01921 protein kinase family protein contains ...    28   3.9  
At3g31370.1 68416.m03999 hypothetical protein contains similarit...    28   5.1  
At5g16150.3 68418.m01888 hexose transporter, putative strong sim...    27   6.8  
At5g16150.2 68418.m01887 hexose transporter, putative strong sim...    27   6.8  
At5g16150.1 68418.m01886 hexose transporter, putative strong sim...    27   6.8  
At1g05700.1 68414.m00591 leucine-rich repeat protein kinase, put...    27   9.0  

>At2g16750.1 68415.m01921 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 617

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -1

Query: 119 TKRYNR*GFILEGLCIVGLLVHDARRTRAMS 27
           TK+    G +L+G  ++G+LV +A+R  AMS
Sbjct: 74  TKKIELKGEVLKGNSVLGVLVKEAKRYNAMS 104


>At3g31370.1 68416.m03999 hypothetical protein contains similarity
           to hypothetical proteins
          Length = 272

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 346 KNSFTLEGIWNSIMCDPHYCNSRYL 420
           K   TLE +W  +M D  +C+S  L
Sbjct: 125 KTKLTLEHVWREVMFDQKWCSSNAL 149


>At5g16150.3 68418.m01888 hexose transporter, putative strong
           similarity to hexose transporter [Arabidopsis thaliana]
           GI:8347250; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 546

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 443 LLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           L YL  +      T  QG WIVS ++  + +       LADKFG
Sbjct: 130 LEYLAKDLGIAENTVLQG-WIVSSLLAGATVGSFTGGALADKFG 172


>At5g16150.2 68418.m01887 hexose transporter, putative strong
           similarity to hexose transporter [Arabidopsis thaliana]
           GI:8347250; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 546

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 443 LLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           L YL  +      T  QG WIVS ++  + +       LADKFG
Sbjct: 130 LEYLAKDLGIAENTVLQG-WIVSSLLAGATVGSFTGGALADKFG 172


>At5g16150.1 68418.m01886 hexose transporter, putative strong
           similarity to hexose transporter [Arabidopsis thaliana]
           GI:8347250; contains Pfam profile PF00083: major
           facilitator superfamily protein
          Length = 546

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 443 LLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFG 574
           L YL  +      T  QG WIVS ++  + +       LADKFG
Sbjct: 130 LEYLAKDLGIAENTVLQG-WIVSSLLAGATVGSFTGGALADKFG 172


>At1g05700.1 68414.m00591 leucine-rich repeat protein kinase,
           putative similar to light repressible receptor protein
           kinase, gi|2129635; contains leucine rich repeat (LRR)
           domains, Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 843

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 428 WPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPI 544
           W      Y     +S+P T+   S+ +S +++ +A+TPI
Sbjct: 219 WIPRNFGYCREINTSLPVTSDNNSYSLSSLVMSTAMTPI 257


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,316,839
Number of Sequences: 28952
Number of extensions: 178725
Number of successful extensions: 382
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)