Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0644
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    29   0.037
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.037
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.037
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.15 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   5.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.8  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 28.7 bits (61), Expect = 0.037
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 92  IVGSGLIGRSWAMLFASVGYQVTVYD 169
           +VG GL+G   A+  A  GY VT+++
Sbjct: 11  VVGGGLVGSLCAIFMAKRGYHVTLFE 36


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 0.037
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 92  IVGSGLIGRSWAMLFASVGYQVTVYD 169
           +VG GL+G   A+  A  GY VT+++
Sbjct: 11  VVGGGLVGSLCAIFMAKRGYHVTLFE 36


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 0.037
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 92  IVGSGLIGRSWAMLFASVGYQVTVYD 169
           +VG GL+G   A+  A  GY VT+++
Sbjct: 11  VVGGGLVGSLCAIFMAKRGYHVTLFE 36


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 364  KVKILWNTFLNKYSSFNCGF 305
            K++I WN  LN    F CGF
Sbjct: 1120 KIRICWNVLLNCVYLFLCGF 1139


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = -2

Query: 240 PSFSRVCNWYLMSSM 196
           P ++ +C WY+  S+
Sbjct: 454 PEYTNICFWYVPKSL 468


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -1

Query: 367 FKVKILWNTFLNKYSSFNCGFQIRRP 290
           F   ++W   ++ +S   CG Q++ P
Sbjct: 421 FAGAMVWTIDMDDFSGTVCGGQVKYP 446


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,014
Number of Sequences: 336
Number of extensions: 3095
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)