Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0639
         (470 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77532-1|CAA54670.1|  450|Drosophila melanogaster serum response...    33   0.15 
AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p pro...    33   0.15 
AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA...    33   0.15 
S72379-1|AAB20671.1|  453|Drosophila melanogaster vestigial prot...    29   3.2  
AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA...    29   3.2  
AE013599-1607|AAF58444.1|  453|Drosophila melanogaster CG3830-PA...    29   3.2  

>X77532-1|CAA54670.1|  450|Drosophila melanogaster serum response
           factor homolog protein.
          Length = 450

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +3

Query: 294 PALGGQRPASAQLVQQHGGAPHRQRP 371
           PALG  RP S  L+Q  GG P  QRP
Sbjct: 33  PALGAGRPPSGGLLQNMGGVPPMQRP 58


>AY095071-1|AAM11399.1|  449|Drosophila melanogaster RE17834p
           protein.
          Length = 449

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +3

Query: 294 PALGGQRPASAQLVQQHGGAPHRQRP 371
           PALG  RP S  L+Q  GG P  QRP
Sbjct: 33  PALGAGRPPSGGLLQNMGGVPPMQRP 58


>AE013599-3853|AAF47195.1|  449|Drosophila melanogaster CG3411-PA
           protein.
          Length = 449

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 15/26 (57%), Positives = 16/26 (61%)
 Frame = +3

Query: 294 PALGGQRPASAQLVQQHGGAPHRQRP 371
           PALG  RP S  L+Q  GG P  QRP
Sbjct: 33  PALGAGRPPSGGLLQNMGGVPPMQRP 58


>S72379-1|AAB20671.1|  453|Drosophila melanogaster vestigial
           protein.
          Length = 453

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 12  AHGRPLHAAHRHVYYSNYATY 74
           AH    HAAH H Y+ N A Y
Sbjct: 378 AHAAHAHAAHAHAYHHNMAQY 398


>AE013599-3461|AAF46899.2| 1218|Drosophila melanogaster CG3536-PA
           protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 288 HKPALGGQRPASAQLVQQHGGAPHRQRPR 374
           H P  GG           HGG PH Q+PR
Sbjct: 457 HHPHHGGAGSGGGSGPGSHGGQPHHQKPR 485


>AE013599-1607|AAF58444.1|  453|Drosophila melanogaster CG3830-PA
           protein.
          Length = 453

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 12  AHGRPLHAAHRHVYYSNYATY 74
           AH    HAAH H Y+ N A Y
Sbjct: 378 AHAAHAHAAHAHAYHHNMAQY 398


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,044,006
Number of Sequences: 53049
Number of extensions: 190053
Number of successful extensions: 732
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)