Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0639
         (470 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical ...    29   1.7  
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p...    28   2.9  
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p...    28   2.9  
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical pr...    27   5.1  

>AL034488-3|CAA22456.1|  504|Caenorhabditis elegans Hypothetical
           protein Y54G11A.3 protein.
          Length = 504

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 216 LRGGGPRPDRATSCRGAVLVLV 281
           L GGG RP++  +CRG V +++
Sbjct: 196 LYGGGSRPEQVEACRGGVEIVI 217


>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
            protein R11A8.7b protein.
          Length = 2584

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 169  PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 71
            PP +AP  P  +SS     +TTN S T+    Y
Sbjct: 2503 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2535


>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
            protein R11A8.7a protein.
          Length = 2606

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 169  PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 71
            PP +AP  P  +SS     +TTN S T+    Y
Sbjct: 2525 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2557


>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
            R11A8.7d protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 169  PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 71
            PP +AP  P  +SS     +TTN S T+    Y
Sbjct: 1346 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 1378


>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
            R11A8.7c protein.
          Length = 1405

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 169  PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 71
            PP +AP  P  +SS     +TTN S T+    Y
Sbjct: 1324 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 1356


>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
            R11A8.7b protein.
          Length = 2584

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 169  PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 71
            PP +AP  P  +SS     +TTN S T+    Y
Sbjct: 2503 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2535


>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
            R11A8.7a protein.
          Length = 2606

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 169  PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 71
            PP +AP  P  +SS     +TTN S T+    Y
Sbjct: 2525 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2557


>Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical
           protein K02B9.2 protein.
          Length = 819

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 147 DQLPTLASESDTRQRTTLPPRSPLSTWRSYCSK 49
           +Q  T+A E+D R  +  PPRS     ++Y S+
Sbjct: 99  NQSGTIAQETDNRNASNFPPRSTTRRGQTYESR 131


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,728,441
Number of Sequences: 27780
Number of extensions: 82363
Number of successful extensions: 298
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)