Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0636
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    32   0.015
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   5.1  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   6.8  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   6.8  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   9.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   9.0  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   9.0  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   9.0  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   9.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   9.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   9.0  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   9.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 32.3 bits (70), Expect = 0.015
 Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 182  SRARPG-DGLRAAHQAGHARLRAGPRHQTKHPAETGVEVGASRALRISARTNAR 340
            S A PG DG  AA   G A   A    Q     ETG+  G S  LR++ +T+AR
Sbjct: 1507 SEAPPGTDGAAAAPTGGAAVTNATSILQVYAAYETGLPSGTSLKLRVTPKTSAR 1560


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -1

Query: 436 AWASSTSMWSRGVPRGSASNARSRCPTVESTRARVCSRGDT*GARGAN 293
           +W SS S++S    RG+ S A +  P + S    V + G   G+ G N
Sbjct: 201 SWPSSWSVFSSASQRGAISFASTITPLLSSISDEVGAGGG--GSGGFN 246


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 107  LQVHLQRDAVDARGLGEGAVRAAAESRARPGDGLRAA 217
            LQ HL RDA     + EGA R  A+ + R  D  RAA
Sbjct: 1045 LQRHLLRDADSWSRICEGAKRITAQLQ-RAWDEERAA 1080


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = +2

Query: 158 GAVRAAAESRARPGDGLRAAHQAGHARLRAG 250
           G VR A E+  RP   L  A +  H   RAG
Sbjct: 471 GFVRVANEAMCRPIRALTQAPRVRHVAPRAG 501


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +3

Query: 93  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 272
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 273 P 275
           P
Sbjct: 157 P 157


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +3

Query: 93  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 272
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 273 P 275
           P
Sbjct: 157 P 157


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +3

Query: 93  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 272
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 273 P 275
           P
Sbjct: 157 P 157


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +3

Query: 93  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 272
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 273 P 275
           P
Sbjct: 157 P 157


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +3

Query: 93  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 272
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTTFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 273 P 275
           P
Sbjct: 157 P 157


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 427 SSTSMWSRGVPRGSASNARSRCPTVESTRARVCSRGDT*GAR 302
           SSTS  SR     S S + S  PT+ +T     + G +  +R
Sbjct: 38  SSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNSR 79


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 427 SSTSMWSRGVPRGSASNARSRCPTVESTRARVCSRGDT*GAR 302
           SSTS  SR     S S + S  PT+ +T     + G +  +R
Sbjct: 38  SSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAAGSSSNSR 79


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 16/61 (26%), Positives = 21/61 (34%)
 Frame = +3

Query: 93  TTRRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNI 272
           TT RP  +T   T +T  DW         +    P T     + P T +   DP      
Sbjct: 99  TTLRPTTTTLRPTTTTTTDWITTTTTEATTTTKFPTTT--TTSAPTTPSQWTDPTITTTT 156

Query: 273 P 275
           P
Sbjct: 157 P 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,024
Number of Sequences: 2352
Number of extensions: 12429
Number of successful extensions: 34
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)