Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0636
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 33 0.14
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 1.0
L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease pr... 31 1.0
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 31 1.0
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 30 1.8
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 29 3.1
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 28 5.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 5.4
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 5.4
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 5.4
U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein. 28 5.4
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 28 5.4
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 28 5.4
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 7.1
Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical pr... 27 9.4
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 27 9.4
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 33.5 bits (73), Expect = 0.14
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Frame = +3
Query: 27 QRREETRTITRALTMVYESDFYTTRRPYRSTYSVTRSTLGDWEKVPFV-PRPSLVPDPVT 203
+ +EET T +L+ VY + + R SV L ++ + P + P T
Sbjct: 139 ENKEETIT---SLSEVYPTGSFVQIIEVRDQGSVLELVLSAHRRIRALEPIDEITPKNET 195
Query: 204 AF-GRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARVL--STVGQRER 374
GRR + AS P+T PP +A +AP +S E+ + S G++++
Sbjct: 196 PLNGRRARGKRAASATSPLTPPPSPPPLAPSVASVAPEISATEEKEEKTTPPSATGEKQK 255
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 31.5 bits (68), Expect = 0.58
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +3
Query: 171 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRAR-- 344
PRP + D R P AS ++ IPPK ESK+ P+ P + + ++RA
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKPKQAVQLKSRAARD 503
Query: 345 ----VLSTVGQRERAFEAD 389
T GQR A E +
Sbjct: 504 EPGGGAQTAGQRRAAAELE 522
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 31.5 bits (68), Expect = 0.58
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Frame = +3
Query: 171 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRAR-- 344
PRP + D R P AS ++ IPPK ESK+ P+ P + + ++RA
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKPKQAVQLKSRAARD 503
Query: 345 ----VLSTVGQRERAFEAD 389
T GQR A E +
Sbjct: 504 EPGGGAQTAGQRRAAAELE 522
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 225 PGTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQTRARV--LSTVGQRERAFEADPL 395
P T AS L+P P PE + P P P+ +T V T G+++ EA PL
Sbjct: 628 PVTEASPLNPQPPPPPSPSPEPEPEPKPPVTPPKNETVDPVHENGTSGEKDGTPEAQPL 686
>L29440-1|AAA98752.1| 570|Caenorhabditis elegans endoprotease
protein.
Length = 570
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 409 SRGVPRGSASNARSRCP--TVESTRARVCSRGDT*GARGANFDSGFGGMFCLV 257
S+G +GS R CP + +S + CS+ D +N SGFG MF +V
Sbjct: 456 SKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPDPTLLIDSNKSSGFGLMFWIV 508
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 409 SRGVPRGSASNARSRCP--TVESTRARVCSRGDT*GARGANFDSGFGGMFCLV 257
S+G +GS R CP + +S + CS+ D +N SGFG MF +V
Sbjct: 828 SKGYGKGSIGYCRPCCPEGSTKSWQCEDCSKPDPTLLIDSNKSSGFGLMFWIV 880
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 99 RRPYRSTYSVTRSTLGDWEKVPFVPRPSLVPD 194
R P+ S+Y T S+LG WE +PF+ P++ D
Sbjct: 301 RYPFYSSYDST-SSLGFWEMLPFLFVPAIFDD 331
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 171 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAP 311
PRP + D R P AS ++ IPPK ESK+ P+ P
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKP 490
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +3
Query: 171 PRPSLVPDPVTAFGRRTKPGTRASVLDPVTKQNIPPKPESKLAPLAP 311
PRP + D R P AS ++ IPPK ESK+ P+ P
Sbjct: 446 PRPVVDDDMGIVTMREAPPSRPAS--SRASRTEIPPKEESKVDPMKP 490
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 171 PRPSLVPDPVTAFGRRTKP-GTRASVLDPVTKQNIPPKPESKLAPLAPYVSPREQ 332
P PS + KP GT+ P + PP+P+ ++P+ P P +Q
Sbjct: 200 PIPSPSASSIAEESLDDKPSGTKMPAQPPPQQHPPPPQPQQIMSPMPPQAPPSQQ 254
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +3
Query: 252 PVTKQNIPPKPESKLAPLAPYVSPREQTRARVLSTVGQRERAFEADPLGTPRDHMDVLLA 431
PV +Q PP+ AP+A P + +A+ V Q +A P + +
Sbjct: 185 PVVQQTPPPQQPVVQAPVAQQAPPSQPQQAQAQPVVQQAPPVQQASPKPVAQPVQQQPVV 244
Query: 432 QAHGRPL 452
QA +P+
Sbjct: 245 QAPPKPI 251
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 592 PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 494
PP +AP P +SS +TTN S T+ Y
Sbjct: 2503 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2535
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 592 PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 494
PP +AP P +SS +TTN S T+ Y
Sbjct: 2525 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2557
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 592 PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 494
PP +AP P +SS +TTN S T+ Y
Sbjct: 1346 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 1378
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 592 PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 494
PP +AP P +SS +TTN S T+ Y
Sbjct: 1324 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 1356
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 592 PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 494
PP +AP P +SS +TTN S T+ Y
Sbjct: 2503 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2535
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 592 PPALAPTRPITYSSERKRHTTTNDSATAQSSQY 494
PP +AP P +SS +TTN S T+ Y
Sbjct: 2525 PPFVAPQAPPGFSSLGNASSTTNPSRTSMQQMY 2557
>U15667-1|AAA51021.1| 562|Caenorhabditis elegans CeSema protein.
Length = 562
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 436 AWASSTSMWSRGVPRGSASNARSRCPTVESTRARVCSRGDT*GARGAN 293
A+ W R + + N RSR + + ARVC + D GAR AN
Sbjct: 230 AYKEHVYFWFREIASEAIDNNRSRSFQIYARVARVC-KNDKGGARPAN 276
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 28.3 bits (60), Expect = 5.4
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Frame = +3
Query: 162 PFVPRPSLVPDPVTAFGRRTKPGTRAS--VLDPVTKQNIPPKPESKLAPLAPYVSPREQT 335
P PRPS +FG P T S L P + + + + +P P +
Sbjct: 30 PTSPRPS----SSDSFGPSAAPSTSLSPPFLSPSYSMDYIIEAMTSSSSTSPVPPP--VS 83
Query: 336 RARVLSTVGQRERAFEADPLGTPRDHMDVLLAQAHGRPLHAAHRH 470
+R ++ V R A P+G R H Q + LHA H H
Sbjct: 84 ASRPVAPVVARVEGLRAVPVGHRRQHSSPGHLQQFQQELHARHHH 128
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 209 RAAHQAGHARLRAGPRHQTKHPAETGVEVGAS 304
R+ HQ HAR + H+++ A VGAS
Sbjct: 366 RSEHQTEHARTGSSSHHESRSRAAAAAPVGAS 397
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 27.9 bits (59), Expect = 7.1
Identities = 29/114 (25%), Positives = 38/114 (33%), Gaps = 16/114 (14%)
Frame = +3
Query: 24 GQRREETRTITRALTMVYESDFYTTRRPYRSTYSVTRSTLGDWEKVPFVPRP-------- 179
G RRE + V + P+ TY D EK+ FVP+P
Sbjct: 47 GVRRELFNEVDGGQIEVTPDNTPNVEDPF-GTYDDNNVVSADNEKILFVPKPYRPGGDKK 105
Query: 180 ---SLVPDPVTAFGRRTKPGTRASVL-----DPVTKQNIPPKPESKLAPLAPYV 317
P T R P T + P T +PP P AP+ P+V
Sbjct: 106 EPKKTTQAPTTIRTTRPPPATTIRTIPFVQTTPATFATLPPAPAVTRAPIQPFV 159
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 254 GVQHGGARARLGAPPEGRHRVGHETRPRHERH 159
GV HG A GA G H H P HE H
Sbjct: 610 GVHHGHHGAGYGAH-HGHHGAHHHHAPHHEHH 640
>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical protein
F16B12.6 protein.
Length = 1392
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 206 GRHRVGHETRPRHERHL 156
G H VGHE RHE H+
Sbjct: 1354 GNHLVGHEELGRHEEHI 1370
>Z69663-2|CAA93509.2| 819|Caenorhabditis elegans Hypothetical
protein K02B9.2 protein.
Length = 819
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 570 DQLPTLASESDTRQRTTLPPRSPLSTWRSYCSK 472
+Q T+A E+D R + PPRS ++Y S+
Sbjct: 99 NQSGTIAQETDNRNASNFPPRSTTRRGQTYESR 131
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 182 TRPRHERHLLPVPER--RPRHAVGGPVGPTRRVEVTLVYH 69
+RP +ER LP + R H++G +GP R + T YH
Sbjct: 33 SRPHYERRQLPAMQHTLRHNHSMGSLMGP-RELPFTHGYH 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,815,976
Number of Sequences: 27780
Number of extensions: 252185
Number of successful extensions: 1027
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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