Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0635
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GUM1 Cluster: Putative uncharacterized protein; n=3; ...    53   6e-06
UniRef50_Q96CT7 Cluster: Coiled-coil domain-containing protein 1...    53   6e-06
UniRef50_UPI00003C042D Cluster: PREDICTED: similar to CG6013-PA;...    49   9e-05
UniRef50_A6YPI8 Cluster: Putative uncharacterized protein; n=1; ...    47   5e-04
UniRef50_Q9VE08 Cluster: CG6013-PA; n=5; Diptera|Rep: CG6013-PA ...    43   0.008
UniRef50_Q5CTZ9 Cluster: Drosophila CG6013 like HMG domain conta...    39   0.099
UniRef50_Q54GW3 Cluster: Putative uncharacterized protein; n=1; ...    35   1.6  
UniRef50_A2FHD4 Cluster: Trichohyalin, putative; n=1; Trichomona...    34   2.8  
UniRef50_Q4Z043 Cluster: Related to CG6013 PROTEIN, putative; n=...    33   6.5  
UniRef50_A7RXQ3 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.5  
UniRef50_A7ATI8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.6  

>UniRef50_Q9GUM1 Cluster: Putative uncharacterized protein; n=3;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 223

 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 24/42 (57%), Positives = 27/42 (64%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           MPKKF  EN K  AAR RK  AK ++  K  KA EDA+W DN
Sbjct: 1   MPKKFASENPKVTAARDRKATAKKDEADKKAKATEDAKWVDN 42


>UniRef50_Q96CT7 Cluster: Coiled-coil domain-containing protein 124;
           n=18; Coelomata|Rep: Coiled-coil domain-containing
           protein 124 - Homo sapiens (Human)
          Length = 223

 Score = 53.2 bits (122), Expect = 6e-06
 Identities = 23/42 (54%), Positives = 30/42 (71%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           MPKKF GEN+K+ AAR R+  AK   D K +K +EDA W+D+
Sbjct: 1   MPKKFQGENTKSAAARARRAEAKAAADAKKQKELEDAYWKDD 42


>UniRef50_UPI00003C042D Cluster: PREDICTED: similar to CG6013-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG6013-PA
           - Apis mellifera
          Length = 208

 Score = 49.2 bits (112), Expect = 9e-05
 Identities = 23/42 (54%), Positives = 28/42 (66%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           MPKKF GENSKAVAAR RK  AK  ++ K     E+  W+D+
Sbjct: 1   MPKKFVGENSKAVAARARKAAAKEAENTKKALEAEEKAWQDD 42


>UniRef50_A6YPI8 Cluster: Putative uncharacterized protein; n=1;
           Triatoma infestans|Rep: Putative uncharacterized protein
           - Triatoma infestans (Assassin bug)
          Length = 219

 Score = 46.8 bits (106), Expect = 5e-04
 Identities = 21/40 (52%), Positives = 28/40 (70%)
 Frame = +3

Query: 282 KKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           KKFT  N+KAV A+ RK  AK  +  K K+A+EDA W+D+
Sbjct: 16  KKFTSVNTKAVVAKARKAEAKELQTSKEKQAIEDAYWQDD 55



 Score = 35.5 bits (78), Expect = 1.2
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = +3

Query: 564 AQISQAKEKMAKPETAKPVPSKVVIEEPPLEENLNRIQLDG 686
           AQI  A EK AK E AKP     + +  PLEEN+NR+ +DG
Sbjct: 107 AQIQMAAEKRAK-EPAKPKVETHLTK--PLEENINRLTIDG 144


>UniRef50_Q9VE08 Cluster: CG6013-PA; n=5; Diptera|Rep: CG6013-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 213

 Score = 42.7 bits (96), Expect = 0.008
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           MPKK  G NSKAV AR+RKE  K    +K  K  ED  W D+
Sbjct: 1   MPKKM-GINSKAVEARERKEATKKATQEKKSKEAEDRLWRDD 41


>UniRef50_Q5CTZ9 Cluster: Drosophila CG6013 like HMG domain
           containing protein with a coiled coil region at the
           N-terminus; n=2; Cryptosporidium|Rep: Drosophila CG6013
           like HMG domain containing protein with a coiled coil
           region at the N-terminus - Cryptosporidium parvum Iowa
           II
          Length = 227

 Score = 39.1 bits (87), Expect = 0.099
 Identities = 16/38 (42%), Positives = 26/38 (68%)
 Frame = +3

Query: 288 FTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           + G N KA+ AR+RK+ A LEK +K ++  E+ +W D+
Sbjct: 3   YGGMNQKALEARERKQAAALEKKRKEEERAENEKWRDD 40


>UniRef50_Q54GW3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 247

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +3

Query: 282 KKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWED 398
           KKF G NSKA  AR +K   K  +++K ++  ED  WE+
Sbjct: 4   KKF-GTNSKAEEARSKKAEVKKNENEKKQRDKEDKMWEE 41


>UniRef50_A2FHD4 Cluster: Trichohyalin, putative; n=1; Trichomonas
            vaginalis G3|Rep: Trichohyalin, putative - Trichomonas
            vaginalis G3
          Length = 1690

 Score = 34.3 bits (75), Expect = 2.8
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 267  LHKMPKKFTGENSKAVAARQRKENAKLEKDQKTKK--AVEDAEWE 395
            L  + KKF  E +     R+++E    E+D++ +K  A EDAEWE
Sbjct: 1130 LENLRKKFAEEEAAEEERRKKREREDKEEDEERRKRRAKEDAEWE 1174


>UniRef50_Q4Z043 Cluster: Related to CG6013 PROTEIN, putative; n=3;
           Plasmodium|Rep: Related to CG6013 PROTEIN, putative -
           Plasmodium berghei
          Length = 261

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVE---DAEWEDN 401
           MP+  TG NS+A+ AR RK   K+EKD+K K+  E   D  W+D+
Sbjct: 1   MPQWGTG-NSRAIEARMRK---KMEKDRKQKELEEKRLDEYWKDD 41


>UniRef50_A7RXQ3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 543

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 13/36 (36%), Positives = 26/36 (72%)
 Frame = +3

Query: 567 QISQAKEKMAKPETAKPVPSKVVIEEPPLEENLNRI 674
           Q++Q+++ MA+P +A+P P K+  ++  LE+ + RI
Sbjct: 303 QVAQSRQ-MARPSSARPAPPKIKKQQDELEDQVGRI 337


>UniRef50_A7ATI8 Cluster: Putative uncharacterized protein; n=1;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 224

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           MP+  +G NS+A+ A+QRK+  +   +++ +    D  WEDN
Sbjct: 1   MPR-MSGINSRALEAKQRKKEQQAALERQKEAEALDRYWEDN 41


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,698,033
Number of Sequences: 1657284
Number of extensions: 9099137
Number of successful extensions: 26896
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 25244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26839
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)