Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0635
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    24   3.9  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   3.9  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.2  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.0  

>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -2

Query: 224 FTHAL-LLHMYISILFYYIYIHWER 153
           F + L L+   I ++  YIY HWER
Sbjct: 2   FVYTLALVAAVIFLVLRYIYSHWER 26


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = -2

Query: 224 FTHAL-LLHMYISILFYYIYIHWER 153
           F + L L+   I ++  YIY HWER
Sbjct: 2   FVYTLALVAAVIFLVLRYIYSHWER 26


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 673  ILFRFSSKGGSSMTTFEGTGLAVSG 599
            ++ R   + GS++  F GTG  VSG
Sbjct: 1028 LVVRIDERHGSAVCDFTGTGPEVSG 1052


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 152 LYSLKLKDIHFVHSCTE 102
           LYS  LKD+     CTE
Sbjct: 239 LYSATLKDLKLAKKCTE 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,713
Number of Sequences: 2352
Number of extensions: 10965
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)