Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0635
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051423-1|AAK92847.1|  213|Drosophila melanogaster GH10002p pro...    43   5e-04
AE014297-2618|AAF55628.1|  213|Drosophila melanogaster CG6013-PA...    43   5e-04
AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA...    29   4.5  
AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA...    29   6.0  

>AY051423-1|AAK92847.1|  213|Drosophila melanogaster GH10002p
           protein.
          Length = 213

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           MPKK  G NSKAV AR+RKE  K    +K  K  ED  W D+
Sbjct: 1   MPKKM-GINSKAVEARERKEATKKATQEKKSKEAEDRLWRDD 41


>AE014297-2618|AAF55628.1|  213|Drosophila melanogaster CG6013-PA
           protein.
          Length = 213

 Score = 42.7 bits (96), Expect = 5e-04
 Identities = 22/42 (52%), Positives = 25/42 (59%)
 Frame = +3

Query: 276 MPKKFTGENSKAVAARQRKENAKLEKDQKTKKAVEDAEWEDN 401
           MPKK  G NSKAV AR+RKE  K    +K  K  ED  W D+
Sbjct: 1   MPKKM-GINSKAVEARERKEATKKATQEKKSKEAEDRLWRDD 41


>AE014296-450|AAF47642.2| 1932|Drosophila melanogaster CG13800-PA
            protein.
          Length = 1932

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +3

Query: 570  ISQAKEKMAKPETAK----PVPSKVVIEEPPLEENLNRIQLD 683
            I+Q  E+++K E  K    P P K +  EP L++ LN+I  D
Sbjct: 890  IAQLPERLSKEEIPKAAPVPAPRKSLTPEPMLDDALNKIAQD 931


>AE014296-1378|AAF50482.1| 1417|Drosophila melanogaster CG7504-PA
           protein.
          Length = 1417

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 588 KMAKPETAKPVPSKVVIEEPPLEENLNR 671
           K+AK + AKP P K V ++PP  E  ++
Sbjct: 567 KLAKTDNAKPPPKKPVPKQPPAIETFSQ 594


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,342,698
Number of Sequences: 53049
Number of extensions: 441583
Number of successful extensions: 1261
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)