Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0630
(668 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo... 27 1.8
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 27 2.4
SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr 2... 27 3.2
SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.3
SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyc... 26 5.6
SPCC830.04c |mug128||sequence orphan|Schizosaccharomyces pombe|c... 26 5.6
SPAC1071.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 5.6
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 25 7.5
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 25 9.9
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 25 9.9
SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate |Schizosacc... 25 9.9
>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 1.8
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 482 LPNHQIYHCWLYLDWLN 432
+ NHQ+Y W+Y+ WL+
Sbjct: 99 IANHQLYSDWMYVWWLS 115
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.1 bits (57), Expect = 2.4
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = -3
Query: 183 NLHFY-HVKEVIMPA-INTRPIVHIFIGFFLILVNTYQTRIPFPH 55
NL F H+ +PA N++ I+ F+ FF+ ++ +Y+ + PH
Sbjct: 815 NLDFIKHISMPCVPACFNSQQILVTFLKFFIKILGSYRNYLRKPH 859
>SPBC1711.12 |||serine peptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 683
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 84 TYQTRIPFPHTHGHRVHS 31
T I FP THGHR+H+
Sbjct: 414 TSYEEIWFPGTHGHRIHA 431
>SPAPB8E5.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 103
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 227 YCELEERASKHLKTWK 274
YC L ERA KH KT++
Sbjct: 30 YCILNERAFKHYKTYR 45
>SPAC4G9.05 |mpf1||meiotic PUF family protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 5.6
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +2
Query: 416 INGTSYLTSPNITNSDIFDDSEATGIANETTVTDSNDVVKDNYTAPIKIIKRDVTGTVVP 595
+ + YLT+ N+ N D F S+ + T+SN T P + D VVP
Sbjct: 111 VKPSPYLTNCNLKNKDTFPVSKNNCSLSSGIFTNSNGTNNCFSTHPKSL--DDAKDNVVP 168
Query: 596 NVQLSKENIIIYSGNST 646
+ ++S N T
Sbjct: 169 KKLNDTDQFPLWSKNET 185
>SPCC830.04c |mug128||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 143
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +2
Query: 197 KDEMTILLYDYCELEER---ASKHLKTWKAWHLVL-YICAAIFGVVNYVF 334
+DE LLYDY ++E+ S + T W+L+ + C VV V+
Sbjct: 27 QDEAKQLLYDYVYIKEKLLTTSSNSLTHYQWYLIYKHTCRCFQQVVRIVY 76
>SPAC1071.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 338
Score = 25.8 bits (54), Expect = 5.6
Identities = 16/74 (21%), Positives = 37/74 (50%)
Frame = +2
Query: 245 RASKHLKTWKAWHLVLYICAAIFGVVNYVFLQHTMKLIDNNCVLYPRQLEFREIDVIING 424
+ ++ + ++ + + + + +F + Y+FL D++ LY RQL + VI+N
Sbjct: 10 KKKRNTQIYRIFFTLTFSLSNLFLAICYLFLNVRTVSSDSSVSLYDRQLFDQSSSVILNP 69
Query: 425 TSYLTSPNITNSDI 466
+ + P+I S +
Sbjct: 70 DT--SDPSIVLSSL 81
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 25.4 bits (53), Expect = 7.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +2
Query: 293 YICAAIFGVVNYV--FLQHTMKLIDNNCVLYPRQLEFREIDVI-INGTSYLTSPNITNSD 463
Y I G +N V +NN + Y RQ++F DVI ++G N T++D
Sbjct: 308 YASGDIMGAINNVKNIFTSATNGFNNNALQYSRQVKFSPADVISLSG----CKDNQTSAD 363
Query: 464 IFDDSEATG 490
+ ATG
Sbjct: 364 TSVNGFATG 372
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 413 IINGTSYLTSPNITNSDIFDDSEAT 487
++ + LTS N T S+++D+S AT
Sbjct: 379 LVRSKTRLTSKNKTVSNVYDESNAT 403
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 9.9
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 446 NITNSDIFDDSEATGIANETTVTDSNDVVKDNYTAPIKIIKRDVTGTVV 592
N T++ F DS + + NET+ S+ ++ NY+ I +T + V
Sbjct: 111 NGTSTSEFIDSISPPLVNETSTISSSKKLEQNYSVTEVIDTNIITSSSV 159
>SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 211
Score = 25.0 bits (52), Expect = 9.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 584 TVVPNVQLSKENIIIYSGNSTRRIVLD 664
T+VP++ ++ +I GNS R +++D
Sbjct: 147 TIVPHILKGEKVLIAAHGNSLRALIMD 173
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,601,640
Number of Sequences: 5004
Number of extensions: 50661
Number of successful extensions: 169
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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