Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0630
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.65 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   1.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.0  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   8.0  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +2

Query: 518 SNDVVKDNYTAPI 556
           SND + DNYT+PI
Sbjct: 22  SNDYILDNYTSPI 34


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/24 (33%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
 Frame = +1

Query: 136 IYRWHYHFLYMIK--VQIMNK*KR 201
           ++ WH+H +Y  +  ++I+NK +R
Sbjct: 207 LHHWHWHLVYPFEGDIRIVNKDRR 230


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 96  ILVNTYQTRIPFPHTHGHRVHSQTSLVPN 10
           +L N Y T  P  HT GH  HS     P+
Sbjct: 404 LLNNVYSTPGPHHHTMGHG-HSHIHATPH 431


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 503 TTVTDSNDVVKDNYTAPIKIIKRDVTGTVVPNVQLSKENIIIYSGNSTRRIVL 661
           TT  ++  V   NYT  + I  R   G +V  V  S   II   GN+T  I++
Sbjct: 10  TTGLENWRVNNSNYTELLPIDMRFNEGHIVSIVFYSVLMIISAIGNTTVLILI 62


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 594 GTTVPVTSL 568
           GTTVP+TSL
Sbjct: 851 GTTVPITSL 859


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,986
Number of Sequences: 438
Number of extensions: 3521
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)