Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0629
(679 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5N7X4 Cluster: Putative uncharacterized protein P0470A... 34 3.7
UniRef50_Q9ZLP4 Cluster: Putative; n=4; Helicobacter|Rep: Putati... 33 6.4
UniRef50_A6G9P9 Cluster: Phage integrase; n=1; Plesiocystis paci... 33 6.4
UniRef50_A1CU51 Cluster: C6 transcription factor, putative; n=3;... 33 6.4
UniRef50_UPI0000E1E696 Cluster: PREDICTED: hypothetical protein;... 33 8.4
UniRef50_Q2R9W0 Cluster: Expressed protein; n=3; Oryza sativa|Re... 33 8.4
UniRef50_Q01A39 Cluster: Chromosome 04 contig 1, DNA sequence; n... 33 8.4
UniRef50_Q8SSF5 Cluster: PROTEIN DISULFIDE ISOMERASE; n=1; Encep... 33 8.4
UniRef50_Q8PZ61 Cluster: Putative uncharacterized protein; n=1; ... 33 8.4
>UniRef50_Q5N7X4 Cluster: Putative uncharacterized protein
P0470A12.26; n=2; Oryza sativa|Rep: Putative
uncharacterized protein P0470A12.26 - Oryza sativa
subsp. japonica (Rice)
Length = 272
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +2
Query: 209 STSLCQRCSLEPGIVCVGAGGGRLSSSGPYEEAVWEDIRQREDLPPSG-*YCSVDRRSEC 385
++SL RC + ++C G G G + P +E VW + + LP SVD S C
Sbjct: 37 ASSLATRCDVPVAVICPGVGAGGEPTWWPSKEEVWAIATRYKSLPEKDRRKHSVDNASYC 96
>UniRef50_Q9ZLP4 Cluster: Putative; n=4; Helicobacter|Rep: Putative
- Helicobacter pylori J99 (Campylobacter pylori J99)
Length = 978
Score = 33.1 bits (72), Expect = 6.4
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Frame = -1
Query: 301 LIGAGAGQTPSSGPHAHNTWLKRTALTQ*CTNLIKTLPMVV-------GAGWQRVKHGSG 143
LIGA Q + NT LK AL Q NLI T+P ++ GA ++K GS
Sbjct: 794 LIGALEDQVFNGELKFQNTSLKNFALMQNMVNLINTIPSLIVFRNPHLGANGYQIKTGSV 853
Query: 142 MYSISTRY 119
++ I+ Y
Sbjct: 854 VFGITKEY 861
>UniRef50_A6G9P9 Cluster: Phage integrase; n=1; Plesiocystis
pacifica SIR-1|Rep: Phage integrase - Plesiocystis
pacifica SIR-1
Length = 401
Score = 33.1 bits (72), Expect = 6.4
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -2
Query: 384 HSDRRSTEQY-HPLGGRSSLCRISSQTASS*GPELDKRPPPAPTHTIPGSS 235
H+D R+T++Y H + G S I++ + P+ D+ PPPAP PGSS
Sbjct: 342 HADLRTTQRYLHTVSGARSQA-IAAISGPEEDPDPDRDPPPAPG---PGSS 388
>UniRef50_A1CU51 Cluster: C6 transcription factor, putative; n=3;
Trichocomaceae|Rep: C6 transcription factor, putative -
Aspergillus clavatus
Length = 715
Score = 33.1 bits (72), Expect = 6.4
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -1
Query: 391 TTTFGPSVYRAISSARWKIFPLSYIFPNCLLIGAGAGQTPSSGP 260
T T PS Y ISS L +I P L + A +TPS GP
Sbjct: 159 TVTRAPSTYLGISSINAVFQVLKWIDPESLELAAAVEETPSPGP 202
>UniRef50_UPI0000E1E696 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 130
Score = 32.7 bits (71), Expect = 8.4
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +2
Query: 437 RFRHLSIILRCMMATRHSSLLPVMVTGRPKGVEAAPHGTVTLARWHQEDGTAHR 598
R+ H S I RC+ +T+H LP+ + P+GV P TV+ + G R
Sbjct: 23 RWYH-SQIPRCLHSTKHLRTLPLFHSVLPRGVRKNPESTVSSGESGSQGGEVRR 75
>UniRef50_Q2R9W0 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 267
Score = 32.7 bits (71), Expect = 8.4
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 630 FDDDSDDENADRCAVPSSWCQRARVTVPCGAASTPLGRPVTI 505
F++DSDDE+ RC + SS + + P AA+TP TI
Sbjct: 200 FEEDSDDESTRRCLMASS---SSSTSSPAAAAATPAPPSATI 238
>UniRef50_Q01A39 Cluster: Chromosome 04 contig 1, DNA sequence; n=2;
Ostreococcus|Rep: Chromosome 04 contig 1, DNA sequence -
Ostreococcus tauri
Length = 234
Score = 32.7 bits (71), Expect = 8.4
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = -2
Query: 627 DDDSDDENADR-CAVPSSWCQRARV-TVPCGAAST 529
DDD DD D C VP+ W R R+ P AA+T
Sbjct: 61 DDDDDDAGEDEGCHVPARWVDRVRIPPEPASAAAT 95
>UniRef50_Q8SSF5 Cluster: PROTEIN DISULFIDE ISOMERASE; n=1;
Encephalitozoon cuniculi|Rep: PROTEIN DISULFIDE
ISOMERASE - Encephalitozoon cuniculi
Length = 517
Score = 32.7 bits (71), Expect = 8.4
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = -1
Query: 427 HFQDKAHIYKFRTTTFGPSVYRAISSARWKIFPLSYIFPNCLLIGAGAGQTPSSGP 260
+FQ AH+YKFR S+YR+ A +F + IFP L GAG PS+ P
Sbjct: 283 YFQRMAHMYKFRA-----SIYRSDDQA---LFERASIFPKEL----GAGSDPSTSP 326
>UniRef50_Q8PZ61 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 444
Score = 32.7 bits (71), Expect = 8.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 176 TYHHWQCFD*ISTSL-CQRCSLEPGIVCVGAGGGRLSSSGPYEEAVW 313
TY W+ + CQ C + PGIV G+ +SSGP E V+
Sbjct: 174 TYTEWEESPYAENGVNCQACHMTPGIVKFEKNPGKAASSGPKREHVY 220
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,564,305
Number of Sequences: 1657284
Number of extensions: 16561683
Number of successful extensions: 52434
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 49173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52388
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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