Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0629
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   1.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   3.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   3.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   5.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.3  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   7.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   7.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   7.0  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 594 CAVPSSWCQRARVTVPCGAASTPLGRPVTIT 502
           C +P  +C     T+P    S  + + +TIT
Sbjct: 168 CVLPDCFCSEDGTTIPGDLPSKDVPQMITIT 198


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = -2

Query: 378 DRRSTEQY---HPLGGRSSLCRISSQTAS 301
           ++ ST  Y   HPL G   LC I    AS
Sbjct: 66  NKSSTSPYPPNHPLSGSKHLCSICGDRAS 94


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 508 HHREETAVAGSHH 470
           HH +  +VAG HH
Sbjct: 14  HHHQSGSVAGHHH 26


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +1

Query: 358 LLGRPTVRMLLFGTCIYALYLENVVSEIQASVNYLALYDGYPPQQSPPGD 507
           ++G  TV +++F     A   +     +  +  +L    GY P    PGD
Sbjct: 360 IVGAVTVYLIMFIQFDIATTTKGAAPAVSKARQFLPALPGYVPVYIRPGD 409


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 12/50 (24%), Positives = 21/50 (42%)
 Frame = +1

Query: 358 LLGRPTVRMLLFGTCIYALYLENVVSEIQASVNYLALYDGYPPQQSPPGD 507
           ++G  TV +++F     A   +     +  +  +L    GY P    PGD
Sbjct: 185 IVGAVTVYLIMFIQFDIATTTKGAAPAVSKARQFLPALPGYVPVYIRPGD 234


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 399 LYICALS*KCRKRDSGICQLSCVV*WLPATAVSS 500
           LY+ A+    RK DSGI    C       T +SS
Sbjct: 13  LYLTAIYVSSRKSDSGIWYWQCNTDEETCTRISS 46


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 558 VTVPCGAASTPLGRPVTITGRR 493
           V+VPCG +  PL     +T R+
Sbjct: 224 VSVPCGTSGNPLEWTGQVTVRK 245


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -2

Query: 648 LLFYSMFDDDSDDENADRCAVPSSWCQRARVT 553
           LLF ++  + S    A R    S++CQ+A +T
Sbjct: 9   LLFLALLKNISALNGAWRWECKSNYCQKAPIT 40


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 448 SVNYLALYDGYPPQQSPP 501
           S++YL++ +  PP   PP
Sbjct: 720 SISYLSMENNAPPPPPPP 737


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 666 DTPPNGLLFYSMFDDDSDDENADRCAVPSS 577
           D   NG L     DD+   ++   C +PS+
Sbjct: 80  DGGKNGKLSDKFLDDEMSKKSCQGCEMPSA 109


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +1

Query: 484 PQQSPPGDG 510
           P  SPPGDG
Sbjct: 196 PMHSPPGDG 204


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 666 DTPPNGLLFYSMFDDDSDDENADRCAVPSS 577
           D   NG L     DD+   ++   C +PS+
Sbjct: 28  DGGKNGKLSDKFLDDEMSKKSCQGCEMPSA 57


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 666 DTPPNGLLFYSMFDDDSDDENADRCAVPSS 577
           D   NG L     DD+   ++   C +PS+
Sbjct: 211 DGGKNGKLSDKFLDDEMSKKSCQGCEMPSA 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,484
Number of Sequences: 336
Number of extensions: 3885
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)