Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0629
(679 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006122-1|AAH06122.3| 225|Homo sapiens MMACHC protein protein. 30 6.6
AL451136-4|CAI13094.1| 282|Homo sapiens methylmalonic aciduria ... 30 6.6
AB065894-1|BAC06110.1| 310|Homo sapiens seven transmembrane hel... 30 6.6
AY043013-1|AAL05591.1| 1877|Homo sapiens neuron navigator 1 prot... 30 8.7
AL645504-5|CAI17014.1| 1877|Homo sapiens neuron navigator 1 prot... 30 8.7
AL645504-3|CAI17012.1| 754|Homo sapiens neuron navigator 1 prot... 30 8.7
AL645504-2|CAI17011.1| 1483|Homo sapiens neuron navigator 1 prot... 30 8.7
AL645504-1|CAI17010.1| 1830|Homo sapiens neuron navigator 1 prot... 30 8.7
AL512788-1|CAH71925.1| 1830|Homo sapiens neuron navigator 1 prot... 30 8.7
AK022631-1|BAB14142.1| 705|Homo sapiens protein ( Homo sapiens ... 30 8.7
AJ488101-1|CAD32470.1| 1836|Homo sapiens steerin1 protein protein. 30 8.7
AB033039-1|BAA86527.1| 484|Homo sapiens KIAA1213 protein protein. 30 8.7
AB032977-1|BAA86465.3| 1770|Homo sapiens KIAA1151 protein protein. 30 8.7
>BC006122-1|AAH06122.3| 225|Homo sapiens MMACHC protein protein.
Length = 225
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 338 DLPFVVYLPKLP--PHRGRSWTNALLRPP 258
DLPF PK P P R RSW + + PP
Sbjct: 192 DLPFTTPAPKKPGNPSRARSWLSPRVSPP 220
>AL451136-4|CAI13094.1| 282|Homo sapiens methylmalonic aciduria
(cobalamin deficiency) cblC type, with homocystinuria
protein.
Length = 282
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 338 DLPFVVYLPKLP--PHRGRSWTNALLRPP 258
DLPF PK P P R RSW + + PP
Sbjct: 249 DLPFTTPAPKKPGNPSRARSWLSPRVSPP 277
>AB065894-1|BAC06110.1| 310|Homo sapiens seven transmembrane helix
receptor protein.
Length = 310
Score = 30.3 bits (65), Expect = 6.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 349 RMILLGRPTVRMLLFGTCIYALYLENVVSEIQASVNYLALYDGY 480
R+IL P+++ + FG C+ LY + + Q + L YD Y
Sbjct: 85 RLILDFTPSIKAIPFGGCVAQLYFFHFLGSTQCFLYTLMAYDRY 128
>AY043013-1|AAL05591.1| 1877|Homo sapiens neuron navigator 1
protein.
Length = 1877
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 752 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 806
>AL645504-5|CAI17014.1| 1877|Homo sapiens neuron navigator 1
protein.
Length = 1877
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 752 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 806
>AL645504-3|CAI17012.1| 754|Homo sapiens neuron navigator 1
protein.
Length = 754
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 309 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 363
>AL645504-2|CAI17011.1| 1483|Homo sapiens neuron navigator 1
protein.
Length = 1483
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 361 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 415
>AL645504-1|CAI17010.1| 1830|Homo sapiens neuron navigator 1
protein.
Length = 1830
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 765 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 819
>AL512788-1|CAH71925.1| 1830|Homo sapiens neuron navigator 1
protein.
Length = 1830
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 765 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 819
>AK022631-1|BAB14142.1| 705|Homo sapiens protein ( Homo sapiens
cDNA FLJ12569 fis, clone NT2RM4000887. ).
Length = 705
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 260 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 314
>AJ488101-1|CAD32470.1| 1836|Homo sapiens steerin1 protein protein.
Length = 1836
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 711 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 765
>AB033039-1|BAA86527.1| 484|Homo sapiens KIAA1213 protein protein.
Length = 484
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 46 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 100
>AB032977-1|BAA86465.3| 1770|Homo sapiens KIAA1151 protein protein.
Length = 1770
Score = 29.9 bits (64), Expect = 8.7
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = -3
Query: 392 NNNIRTVGLPSNIIRSVEDLPFVVYLPKLPPHRGRSWTNALLRPPRTQYLAQANS 228
N +++++G P + ++ P L +LPP R+ + ++PP L + NS
Sbjct: 645 NISLKSIGSPESTPKNQASHPTATKLAELPPTPLRATAKSFVKPPSLANLDKVNS 699
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,837,812
Number of Sequences: 237096
Number of extensions: 2606822
Number of successful extensions: 7791
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7791
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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