Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0628
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   1.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   1.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   1.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   8.4  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   8.4  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 43  NEPYAGESKVVRFYLQQQMVHRHQHHLVPEQEGSL 147
           NEPY    + +     +++   HQHH + E +  L
Sbjct: 104 NEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQL 138


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 43  NEPYAGESKVVRFYLQQQMVHRHQHHLVPEQEGSL 147
           NEPY    + +     +++   HQHH + E +  L
Sbjct: 104 NEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQL 138


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 43  NEPYAGESKVVRFYLQQQMVHRHQHHLVPEQEGSL 147
           NEPY    + +     +++   HQHH + E +  L
Sbjct: 104 NEPYQRTHENMLLRHHEEVADGHQHHFLHENKYQL 138


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 489 TLLTIKIIRKTNIEKSNPRPETIVSNL 569
           T L I +  +    KS P P TI+SN+
Sbjct: 210 TSLQIMVYLQHIFVKSRPSPATIISNV 236


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 489 TLLTIKIIRKTNIEKSNPRPETIVSNL 569
           T L I +  +    KS P P TI+SN+
Sbjct: 210 TSLQIMVYLQHIFVKSRPSPATIISNV 236


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 489 TLLTIKIIRKTNIEKSNPRPETIVSNL 569
           T L I +  +    KS P P TI+SN+
Sbjct: 530 TSLQIMVYLQHIFVKSRPSPATIISNV 556


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +3

Query: 513 RKT-NIEKSNPRPETIVSNLLQDSSK 587
           RKT  +E+ +P P + VS  ++DSS+
Sbjct: 106 RKTWKVEEDSPSPTSSVSPEVKDSSR 131


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -1

Query: 171 GDLRIFSSKRSFLFRNKMMLVSVNHLL 91
           G  +    +   +FR  ++L+ V HL+
Sbjct: 116 GQKKYLEKRNRHIFRTSVLLIFVMHLM 142


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -1

Query: 171 GDLRIFSSKRSFLFRNKMMLVSVNHLL 91
           G  +    +   +FR  ++L+ V HL+
Sbjct: 116 GQKKYLEKRNRHIFRTSVLLIFVMHLM 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,748
Number of Sequences: 336
Number of extensions: 2973
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)