Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0627
(703 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 33 0.030
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 29 0.49
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.64
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 28 1.5
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 28 1.5
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 27 2.0
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 2.0
SPAC4G8.06c |trm12||tRNA methyltransferase Trm12 |Schizosaccharo... 27 3.4
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 3.4
SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr 3|||M... 27 3.4
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 27 3.4
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 26 4.5
SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein 5|... 26 4.5
SPCC613.08 |||CDK regulator |Schizosaccharomyces pombe|chr 3|||M... 26 4.5
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 6.0
SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1||... 26 6.0
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 25 7.9
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 7.9
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 25 7.9
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 25 7.9
SPBC13E7.11 ||SPBC30D10.19c|mitochondrial rhomboid protease|Schi... 25 7.9
SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces pomb... 25 7.9
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 33.5 bits (73), Expect = 0.030
Identities = 23/109 (21%), Positives = 50/109 (45%)
Frame = +2
Query: 236 TSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQ 415
TS K +++ +K + + + N + +KK+ + + ++ + N+ +S
Sbjct: 139 TSQKVEIETVETKPGEPEVKQETN---LQKEKKESKVKLESKEEKISRNLRSSSRSISPV 195
Query: 416 WS*PKS*TKRPAFPKRGQKS*VTLTKSTEPKLKRKSQLPHSLKTTMAPK 562
P+S +P P++ +KS K + L+++S P S T +PK
Sbjct: 196 TEQPQSPKIQPVIPEKKEKS---EKKESSMTLRKRSVSPSSQNTARSPK 241
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 29.5 bits (63), Expect = 0.49
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 199 YDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNE 360
YD +++ T+ S E + D + PE YQNE I+ + ++KN+
Sbjct: 247 YDHLLKVYSGQTSFSLEEIEKDLGRSLPEYPAYQNEEGINALRNVLVAFSWKNQ 300
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 29.1 bits (62), Expect = 0.64
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 233 PTSLKTNHKSIHSKKNQKSIHTKMNQKSIHA 325
P K +H S S ++ KS+ T NQK IH+
Sbjct: 856 PMKKKLSHSSASSTRSIKSLLTNANQKHIHS 886
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 1.5
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +1
Query: 49 SGNPIPDENHYLNTNWLPVTNDNLYCLNLNSELTLISNPDQEK-MDFWEKIY-DKHYRIW 222
S +PI ++ YL T P+ ND + NS T ++ QE+ +DF + K+Y
Sbjct: 410 SKSPISAQSSYLGT---PLKNDEN---SSNSGATSLTGRSQEEHLDFIPSLTPSKNYP-- 461
Query: 223 DETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKE 333
+ + +KN +D + +TY+N +E++ K+E
Sbjct: 462 SKIYSPNKN---LDFSHTASKAETYKNSNELENVKRE 495
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 27.9 bits (59), Expect = 1.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 223 DETTNQSKNEPQIDTFKK-EPEIDTYQNESEIDTCKKETEIDTYKN-EPEIDAPK 381
D + + E QID + + N+ E+DT E E T+K+ E ++ +PK
Sbjct: 96 DASLGKKSTEHQIDGIRNGSSNLQMEGNDKELDTDNNEDESTTFKDEEDDLISPK 150
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +1
Query: 190 EKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKK---ETEID 345
E +Y Y +W + ++QSK + + +++ E D +S+ +T K ET +D
Sbjct: 1094 ENVYINSYNLWVDQSSQSKKQNRTTNWRRWLESDEGWRKSKANTDIKFFSETTLD 1148
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Frame = +1
Query: 223 DETTNQSK--NEPQIDTF----KKEPEIDTYQNESEIDTCKKETEIDTYKNEPEID 372
D T N+ + NE ++D KKE E + +NE E D ++E E + E E D
Sbjct: 71 DTTINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEED 126
>SPAC4G8.06c |trm12||tRNA methyltransferase Trm12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 214 RIW-DETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEI 369
+ W D N++K I +DTY N+ E D KK I T N+ ++
Sbjct: 12 KYWKDVVQNKNKFLKNIGIISGPKLVDTYSNQFEADFLKKCVLIPTSYNKEDL 64
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 3.4
Identities = 31/147 (21%), Positives = 58/147 (39%)
Frame = -3
Query: 689 FMWSLTGLCSFDSSWAGSLNSSIISLTLGACSGVSVFSVTIKVWEPSLFSRSVVVVICVS 510
F+ SL S D S + S S + + +G + T VW +F+R +
Sbjct: 427 FVTSLLRRSSIDGSASSSSASLAVPTVSSSTTGSLHYKTTTTVWVTEVFTRYLGDDSTPV 486
Query: 509 TSALSIWXXXXXXXXXXXXXXXXLFMTWVMTTVSITDTISGSCLGASISGSFLYVSISVS 330
TS+ SI+ ++ + + + + ++ S GA S S + SVS
Sbjct: 487 TSS-SIFSTATEATDTSVQTSSAIYDSSSTSNIQSSSSVYASSTGALSSNSLSSSTSSVS 545
Query: 329 FLHVSISDSFWYVSISGSFLNVSICGS 249
++ + S Y S + + + S+ S
Sbjct: 546 TSYIPNASSSVYASSTEALSSNSLSSS 572
>SPCC550.09 |||peroxin Pex32 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 556 SQTLIVTEKTETPEQAPSVKEMILEFSEPAQLESNE 663
SQ T KTE EQ S + +EPA ++SNE
Sbjct: 139 SQPKTTTLKTEVKEQQASQSPSVEGENEPAGVKSNE 174
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/65 (20%), Positives = 33/65 (50%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++R ++ ++ +++ + +K P + K + +K++K K+N+ S+H K
Sbjct: 933 RSRGDKKVVDNKRDASDSEDLAIKNPMNKKAKVGKVDFRKHEK----KLNKASMHRDKFS 988
Query: 338 KSIHT 352
+HT
Sbjct: 989 TGMHT 993
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 26.2 bits (55), Expect = 4.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 239 SLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQKSMRPNMNR 391
S +T SI S Q +I + HA+ + HT+ Q+S+ ++ R
Sbjct: 718 SRQTTSSSIDSNNVQSNIEFLKGLNATHARSTSQVSHTQRLQQSISTSLER 768
>SPCC1259.14c |meu27||S. pombe specific UPF0300 family protein
5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/74 (20%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +1
Query: 148 TLISNPDQEKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPE-IDTYQNESEIDTC 324
T+ S+P + +W Y+K I T + K ++ +PE + + S++ +
Sbjct: 146 TINSSPFKSLSQYWNAAYNKKESISSSTNSNIKLHLAARKYQTKPEKFNENSSISQVTSA 205
Query: 325 KKETEIDTYKNEPE 366
K T+ ++ +P+
Sbjct: 206 IKATKAFSHLTQPK 219
>SPCC613.08 |||CDK regulator |Schizosaccharomyces pombe|chr
3|||Manual
Length = 325
Score = 26.2 bits (55), Expect = 4.5
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +1
Query: 535 LLENNDGSQT-LIVTEK-TETPEQA-PSVKEMILEFSEPAQLESNEHKPVN 678
LLE N GSQ LIV E+ P Q P + M+L E Q NE++P N
Sbjct: 172 LLEPNSGSQVGLIVNERLINMPVQVIPPMYNMLL---EEMQWAINENEPYN 219
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.8 bits (54), Expect = 6.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -1
Query: 403 RTLFPVHVWAHRFLVHF-CMYRFLFLFCMYRFLIHFGM 293
+T V + FL F C+ F FLF ++ F +HF +
Sbjct: 271 KTGLTVERFFQHFLARFFCLIFFPFLFFLFWFYMHFNI 308
>SPAC3H5.11 |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 393
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 673 PVCVHSTLVGPVH*IPVSFL*RSVLVRGSQFSL*LSKFGSHR 548
P+C HS + P+H +P S V+ + +Q S +S G +R
Sbjct: 310 PICAHSLSLRPIH-VPDSMALHVVIPQDAQQSSWISFDGRNR 350
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 25.4 bits (53), Expect = 7.9
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSI--HSKKNQKSIHTKMNQKSIHAKK 331
Q K+ + G K + +S + L ++S+ +S+KN+K K Q+S
Sbjct: 264 QKEEKKTISQGNKPNSRDEDSELSIDVPLSMLNRSLANNSQKNKKRTPNKPLQESSINSV 323
Query: 332 KQKSIHTKMNQKSMRPNMNR 391
K+ + + +K RP N+
Sbjct: 324 KEGESNPVVKRKRGRPRKNK 343
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 7.9
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -3
Query: 695 LVFMWSLTGLCSFDSSWAGSLNSSIISLTLGACSGVSVFSVT 570
L FM + G CS D G NS + G SGV +T
Sbjct: 3883 LFFMVANNGFCSPDLPQEGKSNSGELESGTGLGSGVGAEDIT 3924
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/58 (20%), Positives = 30/58 (51%)
Frame = +1
Query: 202 DKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEIDTYKNEPEIDA 375
D+H+R + + + + Q + K+E +Y+N+ + ++ T D Y++ + D+
Sbjct: 174 DRHHRSNQDRSRERSDNEQHSSDKREHSRRSYRNDR--NNWRERTHNDRYRHRDKYDS 229
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 202 DKHYRIWDETTNQSKN 249
DK RIWD T+N+ K+
Sbjct: 242 DKTIRIWDSTSNKKKS 257
>SPBC13E7.11 ||SPBC30D10.19c|mitochondrial rhomboid
protease|Schizosaccharomyces pombe|chr 2|||Manual
Length = 298
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 93 VGVQIVVFVRYRVPRFSEL 37
+G+ + VF +R PRFS L
Sbjct: 84 IGINVGVFALWRAPRFSHL 102
>SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 339
Score = 25.4 bits (53), Expect = 7.9
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 190 EKIYDKHYRIWDETTNQS-KNEPQIDTFKKEPEIDTYQNESEIDTCKKETEID 345
+++Y+ Y DET+ + E ++ FKK+ ++T + EI K + +++
Sbjct: 30 KRVYED-YDFKDETSAKPIPTEKKLKVFKKDDNVETLLSALEIQNEKSKQQVE 81
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,930,586
Number of Sequences: 5004
Number of extensions: 61438
Number of successful extensions: 245
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 325165428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -