Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0627
(703 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein. 33 0.99
CR536513-1|CAG38751.1| 545|Homo sapiens TRIP10 protein. 33 0.99
BT020171-1|AAV43773.1| 545|Homo sapiens thyroid hormone recepto... 33 0.99
BT020167-1|AAV38969.1| 545|Homo sapiens thyroid hormone recepto... 33 0.99
BT006698-1|AAP35344.1| 545|Homo sapiens thyroid hormone recepto... 33 0.99
BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence si... 33 0.99
BC013002-1|AAH13002.1| 545|Homo sapiens thyroid hormone recepto... 33 0.99
AY081141-1|AAL89588.1| 456|Homo sapiens truncated Cdc42 interac... 33 0.99
AJ000414-1|CAA04062.1| 545|Homo sapiens Cdc42-interacting prote... 33 0.99
AF380114-1|AAK77492.1| 593|Homo sapiens FELIC protein. 33 0.99
AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein. 33 0.99
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 33 1.3
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 33 1.3
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 33 1.3
BC050570-1|AAH50570.2| 81|Homo sapiens LOC441212 protein protein. 33 1.3
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 33 1.3
AK223109-1|BAD96829.1| 545|Homo sapiens thyroid hormone recepto... 33 1.3
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 33 1.3
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 33 1.3
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 33 1.3
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 33 1.3
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 33 1.3
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 33 1.3
BX537868-1|CAD97870.1| 325|Homo sapiens hypothetical protein pr... 32 2.3
BC108741-1|AAI08742.1| 394|Homo sapiens RRBP1 protein protein. 32 2.3
BC092422-1|AAH92422.1| 325|Homo sapiens chromosome 12 open read... 32 2.3
BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein. 32 2.3
BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein. 32 2.3
BC009700-1|AAH09700.1| 304|Homo sapiens Unknown (protein for IM... 32 2.3
AL132765-6|CAC10587.1| 977|Homo sapiens ribosome binding protei... 32 2.3
AL132765-5|CAM20086.1| 300|Homo sapiens ribosome binding protei... 32 2.3
AL132765-4|CAH74034.1| 1410|Homo sapiens ribosome binding protei... 32 2.3
AK095477-1|BAC04555.1| 325|Homo sapiens protein ( Homo sapiens ... 32 2.3
AF006751-1|AAC25977.1| 977|Homo sapiens ES/130 protein. 32 2.3
AB287347-1|BAF73807.1| 1540|Homo sapiens p180/ribosome receptor ... 32 2.3
AB037819-1|BAA92636.2| 1586|Homo sapiens KIAA1398 protein protein. 32 2.3
BC037870-1|AAH37870.1| 465|Homo sapiens C10orf81 protein protein. 31 3.0
BC036365-1|AAH36365.2| 295|Homo sapiens C10orf81 protein protein. 31 3.0
AL592546-10|CAI12645.1| 465|Homo sapiens novel protein protein. 31 3.0
AL592546-9|CAI12644.1| 282|Homo sapiens novel protein protein. 31 3.0
AK128811-1|BAC87618.1| 363|Homo sapiens protein ( Homo sapiens ... 31 3.0
BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein. 31 4.0
BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein. 31 4.0
AL161454-1|CAO03517.1| 181|Homo sapiens chromosome 9 open readi... 31 4.0
AL159167-2|CAO03560.1| 181|Homo sapiens chromosome 9 open readi... 31 4.0
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 4.0
AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein pro... 31 4.0
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 4.0
AL590077-2|CAI40419.1| 361|Homo sapiens novel protein protein. 31 5.3
BC028004-1|AAH28004.1| 621|Homo sapiens DMXL1 protein protein. 30 7.0
BC025928-1|AAH25928.2| 221|Homo sapiens retinitis pigmentosa 9 ... 30 9.2
>D87071-1|BAA13240.1| 2035|Homo sapiens KIAA0233 protein.
Length = 2035
Score = 33.1 bits (72), Expect = 0.99
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = -1
Query: 397 LFPVHVWAHRFLVHFCMYRFLFLFCMYRFLIHFGMYRFLV 278
+F V +A R +V+ +Y FLFL C+ F +++ ++R L+
Sbjct: 102 MFIVVSFAGRLVVYKIVYMFLFLLCLTLFQVYYSLWRKLL 141
>CR536513-1|CAG38751.1| 545|Homo sapiens TRIP10 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>BT020171-1|AAV43773.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>BT020167-1|AAV38969.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>BT006698-1|AAP35344.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>BC150271-1|AAI50272.1| 2035|Homo sapiens family with sequence
similarity 38, member A protein.
Length = 2035
Score = 33.1 bits (72), Expect = 0.99
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = -1
Query: 397 LFPVHVWAHRFLVHFCMYRFLFLFCMYRFLIHFGMYRFLV 278
+F V +A R +V+ +Y FLFL C+ F +++ ++R L+
Sbjct: 102 MFIVVSFAGRLVVYKIVYMFLFLLCLTLFQVYYSLWRKLL 141
>BC013002-1|AAH13002.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>AY081141-1|AAL89588.1| 456|Homo sapiens truncated Cdc42
interaction protein 4 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>AJ000414-1|CAA04062.1| 545|Homo sapiens Cdc42-interacting protein
4 protein.
Length = 545
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>AF380114-1|AAK77492.1| 593|Homo sapiens FELIC protein.
Length = 593
Score = 33.1 bits (72), Expect = 0.99
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + +++Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVDQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>AB161230-1|BAF03565.1| 2090|Homo sapiens Mib protein.
Length = 2090
Score = 33.1 bits (72), Expect = 0.99
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = -1
Query: 397 LFPVHVWAHRFLVHFCMYRFLFLFCMYRFLIHFGMYRFLV 278
+F V +A R +V+ +Y FLFL C+ F +++ ++R L+
Sbjct: 156 MFIVVSFAGRLVVYKIVYMFLFLLCLTLFQVYYSLWRKLL 195
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 852 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 911
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 912 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 958
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 959 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 995
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 715 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 774
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 775 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 821
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 822 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 858
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 167 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 226
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 227 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 273
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 274 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 310
>BC050570-1|AAH50570.2| 81|Homo sapiens LOC441212 protein protein.
Length = 81
Score = 32.7 bits (71), Expect = 1.3
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +2
Query: 194 KSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQKS 370
K + SG R +S + K H KK +K H K +K KKK+K +K N+ S
Sbjct: 21 KQLLEDSTSGEDRSSSSSSEGKEKHKKKKKKEKH-KKRKKEKKKKKKRKHKSSKSNEGS 78
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 1819 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1878
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 1879 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 1925
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 1926 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 1962
>AK223109-1|BAD96829.1| 545|Homo sapiens thyroid hormone receptor
interactor 10 variant protein.
Length = 545
Score = 32.7 bits (71), Expect = 1.3
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
++RTKR W FG+K+ T TE P + ++ + + ++ Q+ A KK
Sbjct: 315 RSRTKR-WPFGKKNKTVVTEDFSHLPPEQQRKRLQQQLEERSRELQKEVGQR--EALKKM 371
Query: 338 KSIHTKMNQ 364
K ++ K Q
Sbjct: 372 KDVYEKTPQ 380
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 1859 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 1919 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 1965
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 1966 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 1859 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 1919 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 1965
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 1966 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 1859 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 1919 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 1965
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 1966 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 1859 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 1919 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 1965
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 1966 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 1540 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1599
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 1600 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 1646
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 1647 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 1683
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 32.7 bits (71), Expect = 1.3
Identities = 37/159 (23%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Frame = +2
Query: 155 SQTRTKRRWTFGRKSTTNTTESGMKRPTSLKTN-----HKSIHSKKNQKSIHTKMNQKSI 319
SQTR++ R R+S+ + ++S +R S + H+S ++ +K ++ N+K++
Sbjct: 1865 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1924
Query: 320 HAKKKQKSIHTKMNQKSMRPNMNRK*CPLSRQWS*PKS*TKRPAFPKRGQKS*VTLTKST 499
A+ + S +S P+ R+ + R+ S S ++R P R +S
Sbjct: 1925 RARSRTPS----RRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSR---------RSR 1971
Query: 500 EPKLKRKSQLPHSLKTTMAPKL**SQRKLRPPNKHRASK 616
P R+S+ P T + + R+ R P++ R S+
Sbjct: 1972 TP--SRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2008
>BX537868-1|CAD97870.1| 325|Homo sapiens hypothetical protein
protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 49 SGNPIPDENHYLNTNWLPV-TNDNLYC 126
+GNP+PDEN ++ W+PV N+ YC
Sbjct: 128 NGNPVPDENGHI-PGWVPVEKNNKQYC 153
>BC108741-1|AAI08742.1| 394|Homo sapiens RRBP1 protein protein.
Length = 394
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 30 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 84
Query: 362 QKSMRPNM 385
PN+
Sbjct: 85 DHDPAPNV 92
>BC092422-1|AAH92422.1| 325|Homo sapiens chromosome 12 open reading
frame 29 protein.
Length = 325
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 49 SGNPIPDENHYLNTNWLPV-TNDNLYC 126
+GNP+PDEN ++ W+PV N+ YC
Sbjct: 128 NGNPVPDENGHI-PGWVPVEKNNKQYC 153
>BC058014-1|AAH58014.1| 332|Homo sapiens C12orf29 protein protein.
Length = 332
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 49 SGNPIPDENHYLNTNWLPV-TNDNLYC 126
+GNP+PDEN ++ W+PV N+ YC
Sbjct: 135 NGNPVPDENGHI-PGWVPVEKNNKQYC 160
>BC035136-1|AAH35136.2| 323|Homo sapiens C12orf29 protein protein.
Length = 323
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 49 SGNPIPDENHYLNTNWLPV-TNDNLYC 126
+GNP+PDEN ++ W+PV N+ YC
Sbjct: 126 NGNPVPDENGHI-PGWVPVEKNNKQYC 151
>BC009700-1|AAH09700.1| 304|Homo sapiens Unknown (protein for
IMAGE:3900104) protein.
Length = 304
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 30 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 84
Query: 362 QKSMRPNM 385
PN+
Sbjct: 85 DHDPAPNV 92
>AL132765-6|CAC10587.1| 977|Homo sapiens ribosome binding protein 1
homolog 180kDa (dog) protein.
Length = 977
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 30 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 84
Query: 362 QKSMRPNM 385
PN+
Sbjct: 85 DHDPAPNV 92
>AL132765-5|CAM20086.1| 300|Homo sapiens ribosome binding protein 1
homolog 180kDa (dog) protein.
Length = 300
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 30 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 84
Query: 362 QKSMRPNM 385
PN+
Sbjct: 85 DHDPAPNV 92
>AL132765-4|CAH74034.1| 1410|Homo sapiens ribosome binding protein 1
homolog 180kDa (dog) protein.
Length = 1410
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 30 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 84
Query: 362 QKSMRPNM 385
PN+
Sbjct: 85 DHDPAPNV 92
>AK095477-1|BAC04555.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ38158 fis, clone DFNES2001091. ).
Length = 325
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 49 SGNPIPDENHYLNTNWLPV-TNDNLYC 126
+GNP+PDEN ++ W+PV N+ YC
Sbjct: 128 NGNPVPDENGHI-PGWVPVEKNNKQYC 153
>AF006751-1|AAC25977.1| 977|Homo sapiens ES/130 protein.
Length = 977
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 30 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 84
Query: 362 QKSMRPNM 385
PN+
Sbjct: 85 DHDPAPNV 92
>AB287347-1|BAF73807.1| 1540|Homo sapiens p180/ribosome receptor
protein.
Length = 1540
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 30 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 84
Query: 362 QKSMRPNM 385
PN+
Sbjct: 85 DHDPAPNV 92
>AB037819-1|BAA92636.2| 1586|Homo sapiens KIAA1398 protein protein.
Length = 1586
Score = 31.9 bits (69), Expect = 2.3
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 182 TFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMN 361
TF K T+ +R KT+H+ + KK +K++ +K KKK++ + K+
Sbjct: 56 TFSMKETSYEEALANQRKEMAKTHHQKVEKKKKEKTV-----EKKGKTKKKEEKPNGKIP 110
Query: 362 QKSMRPNM 385
PN+
Sbjct: 111 DHDPAPNV 118
>BC037870-1|AAH37870.1| 465|Homo sapiens C10orf81 protein protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +1
Query: 61 IPDENHYLNTNWLPVTNDNLYCLNLNSELTLISNPDQ--EKMDFWEKIYDKHY--RIWDE 228
+ +ENHYL + + DN+ + + E PDQ +++ + + ++ E
Sbjct: 203 VKEENHYLTPRSVLLELDNIIASSDSGESIETDGPDQVSGRIECHYEPMESYFFKETSHE 262
Query: 229 TTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEID 345
+ + SK EPQ ++ ++ + S ID C +++
Sbjct: 263 SVDSSKEEPQTLPETQDGDLHLQEQGSGIDWCLSPADVE 301
>BC036365-1|AAH36365.2| 295|Homo sapiens C10orf81 protein protein.
Length = 295
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +1
Query: 61 IPDENHYLNTNWLPVTNDNLYCLNLNSELTLISNPDQ--EKMDFWEKIYDKHY--RIWDE 228
+ +ENHYL + + DN+ + + E PDQ +++ + + ++ E
Sbjct: 36 VKEENHYLTPRSVLLELDNIIASSDSGESIETDGPDQVSGRIECHYEPMESYFFKETSHE 95
Query: 229 TTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEID 345
+ + SK EPQ ++ ++ + S ID C +++
Sbjct: 96 SVDSSKEEPQTLPETQDGDLHLQEQGSGIDWCLSPADVE 134
>AL592546-10|CAI12645.1| 465|Homo sapiens novel protein protein.
Length = 465
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +1
Query: 61 IPDENHYLNTNWLPVTNDNLYCLNLNSELTLISNPDQ--EKMDFWEKIYDKHY--RIWDE 228
+ +ENHYL + + DN+ + + E PDQ +++ + + ++ E
Sbjct: 203 VKEENHYLTPRSVLLELDNIIASSDSGESIETDGPDQVSGRIECHYEPMESYFFKETSHE 262
Query: 229 TTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEID 345
+ + SK EPQ ++ ++ + S ID C +++
Sbjct: 263 SVDSSKEEPQTLPETQDGDLHLQEQGSGIDWCLSPADVE 301
>AL592546-9|CAI12644.1| 282|Homo sapiens novel protein protein.
Length = 282
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +1
Query: 61 IPDENHYLNTNWLPVTNDNLYCLNLNSELTLISNPDQ--EKMDFWEKIYDKHY--RIWDE 228
+ +ENHYL + + DN+ + + E PDQ +++ + + ++ E
Sbjct: 23 VKEENHYLTPRSVLLELDNIIASSDSGESIETDGPDQVSGRIECHYEPMESYFFKETSHE 82
Query: 229 TTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEID 345
+ + SK EPQ ++ ++ + S ID C +++
Sbjct: 83 SVDSSKEEPQTLPETQDGDLHLQEQGSGIDWCLSPADVE 121
>AK128811-1|BAC87618.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ46008 fis, clone SMINT2017964. ).
Length = 363
Score = 31.5 bits (68), Expect = 3.0
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +1
Query: 61 IPDENHYLNTNWLPVTNDNLYCLNLNSELTLISNPDQ--EKMDFWEKIYDKHY--RIWDE 228
+ +ENHYL + + DN+ + + E PDQ +++ + + ++ E
Sbjct: 209 VKEENHYLTPRSVLLELDNIIASSDSGESIETDGPDQVSGRIECHYEPMESYFFKETSHE 268
Query: 229 TTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEID 345
+ + SK EPQ ++ ++ + S ID C +++
Sbjct: 269 SVDSSKEEPQTLPETQDGDLHLQEQGSGIDWCLSPADVE 307
>BC070050-1|AAH70050.1| 1022|Homo sapiens SRRM2 protein protein.
Length = 1022
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
Q + K++ GR+S +++ K+ + K + SKK + T +++ KK++
Sbjct: 187 QKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRK 246
Query: 338 KSIHTKMNQKSMR 376
+S T KS R
Sbjct: 247 RSRSTTPAPKSRR 259
>BC041155-1|AAH41155.1| 311|Homo sapiens SRRM2 protein protein.
Length = 311
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
Q + K++ GR+S +++ K+ + K + SKK + T +++ KK++
Sbjct: 91 QKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRK 150
Query: 338 KSIHTKMNQKSMR 376
+S T KS R
Sbjct: 151 RSRSTTPAPKSRR 163
>AL161454-1|CAO03517.1| 181|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 181
Score = 31.1 bits (67), Expect = 4.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 197 STTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQK 313
+T + ES ++PT L T K +KNQ S+ T +QK
Sbjct: 133 NTASDDESSDEQPTCLSTEAKDAGCEKNQDSLGTSKHQK 171
>AL159167-2|CAO03560.1| 181|Homo sapiens chromosome 9 open reading
frame 102 protein.
Length = 181
Score = 31.1 bits (67), Expect = 4.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 197 STTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQK 313
+T + ES ++PT L T K +KNQ S+ T +QK
Sbjct: 133 NTASDDESSDEQPTCLSTEAKDAGCEKNQDSLGTSKHQK 171
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein
protein.
Length = 2752
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
Q + K++ GR+S +++ K+ + K + SKK + T +++ KK++
Sbjct: 187 QKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRK 246
Query: 338 KSIHTKMNQKSMR 376
+S T KS R
Sbjct: 247 RSRSTTPAPKSRR 259
>AB016088-1|BAA83714.1| 956|Homo sapiens RNA binding protein
protein.
Length = 956
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
Q + K++ GR+S +++ K+ + K + SKK + T +++ KK++
Sbjct: 152 QKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRK 211
Query: 338 KSIHTKMNQKSMR 376
+S T KS R
Sbjct: 212 RSRSTTPAPKSRR 224
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 4.0
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 158 QTRTKRRWTFGRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQ 337
Q + K++ GR+S +++ K+ + K + SKK + T +++ KK++
Sbjct: 235 QKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRK 294
Query: 338 KSIHTKMNQKSMR 376
+S T KS R
Sbjct: 295 RSRSTTPAPKSRR 307
>AL590077-2|CAI40419.1| 361|Homo sapiens novel protein protein.
Length = 361
Score = 30.7 bits (66), Expect = 5.3
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +2
Query: 443 RPAFPKRGQKS*VT--LTKSTE-PKLKRKSQLPHSLKTTMAPKL**SQRKLRPP 595
RP++PKR KS + L+KS+ K +K L K A KL S + +RPP
Sbjct: 157 RPSYPKRSSKSSCSKKLSKSSHLEKAHKKGSLEKLCKLDYACKLASSDKPVRPP 210
>BC028004-1|AAH28004.1| 621|Homo sapiens DMXL1 protein protein.
Length = 621
Score = 30.3 bits (65), Expect = 7.0
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 218 SGMKRPTSL---KTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQK 367
SG+ R TS+ ++KS +SKK +K K +K KKK+K K +K
Sbjct: 567 SGLTRSTSMLISSGHNKSSNSKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 619
>BC025928-1|AAH25928.2| 221|Homo sapiens retinitis pigmentosa 9
(autosomal dominant) protein.
Length = 221
Score = 29.9 bits (64), Expect = 9.2
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 194 KSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQKS 370
K + S R +S + K H KK +K H K +K KKK+K +K N+ S
Sbjct: 161 KQLLEDSTSDEDRSSSSSSEGKEKHKKKKKKEKH-KKRKKEKKKKKKRKHKSSKSNEGS 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.311 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,147,630
Number of Sequences: 237096
Number of extensions: 2113768
Number of successful extensions: 4688
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 4399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4656
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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