Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0627
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical pr... 31 0.60
U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical pr... 31 0.80
U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical pr... 31 0.80
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 29 3.2
Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z72501-1|CAA96582.1| 584|Caenorhabditis elegans Hypothetical pr... 29 4.3
U41550-2|AAA83285.2| 301|Caenorhabditis elegans Hypothetical pr... 29 4.3
U21310-4|AAA62518.1| 165|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81586-7|CAB04693.1| 359|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 28 5.6
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 28 5.6
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical... 28 7.4
AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical... 28 7.4
AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical... 28 7.4
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 28 7.4
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 28 7.4
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical ... 27 9.8
AF099917-2|AAC68785.1| 235|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z75550-7|CAA99925.2| 195|Caenorhabditis elegans Hypothetical
protein T22C1.9 protein.
Length = 195
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 239 SLKTNHKSIHSKKNQKSIHTKMNQKSI-HAKKKQKSIH 349
SL + KSI SKK+ KS +K ++K + H K++ +H
Sbjct: 111 SLAKSFKSIRSKKSMKSTKSKKSEKDVGHDDHKKEDVH 148
>U40413-4|AAM51516.1| 699|Caenorhabditis elegans Hypothetical
protein C18B2.5b protein.
Length = 699
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 188 GRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQK 367
G + + E +RP S ++ S++S Q S HT QK + +++ + H K Q
Sbjct: 275 GEEINLHHDEVAYERPRSELSSPGSVYSSHTQASFHTGGTQKLRNLQRQVEDAHAKKAQL 334
Query: 368 SMRPNMNR 391
S + + R
Sbjct: 335 SHQVDRQR 342
>U40413-3|AAK39176.1| 673|Caenorhabditis elegans Hypothetical
protein C18B2.5a protein.
Length = 673
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +2
Query: 188 GRKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQK 367
G + + E +RP S ++ S++S Q S HT QK + +++ + H K Q
Sbjct: 249 GEEINLHHDEVAYERPRSELSSPGSVYSSHTQASFHTGGTQKLRNLQRQVEDAHAKKAQL 308
Query: 368 SMRPNMNR 391
S + + R
Sbjct: 309 SHQVDRQR 316
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +2
Query: 161 TRTKRRWTFGRKSTTNTTESGMKRPTSLKT--NHKSIHSKKNQKSIHTKMNQKSIHAKKK 334
T T T+ TTE + T+ K HKS + TK + K H K K
Sbjct: 195 TEASEEATTTSSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTK 254
Query: 335 QKSIHT 352
++ + T
Sbjct: 255 EEKVTT 260
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 567 QSLGAIVVFKECGSCDLRFNFGSVDLVRVTHDFCPLFGNAGLFVHDLG-YDHCLDN 403
Q L +V+ K GSC +F G+ + +++ FC F L + +G +H + N
Sbjct: 74 QKLETLVIGKLDGSCSDKFTSGAGEFLKIACRFCTAFVGVTLTWNIVGLLEHIIKN 129
>Z99288-9|CAB16551.2| 335|Caenorhabditis elegans Hypothetical
protein ZK262.10 protein.
Length = 335
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
Frame = -1
Query: 379 WAHRFL-----VHFCMYRFLFLFCMYRFL-IHFGMYRFLVLF 272
WAH ++ V + LF+F + +HFG YRFL++F
Sbjct: 5 WAHHYIPKIGGVFSIIINLLFIFIAHDDKHVHFGNYRFLLIF 46
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = -3
Query: 191 SQKSIFSWSGFEIKVNSEF-----RFRQYKLSFVTGS 96
SQ + FSW F +KVNSE F LSFV S
Sbjct: 402 SQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVANS 438
>Z72501-1|CAA96582.1| 584|Caenorhabditis elegans Hypothetical
protein C04C11.2 protein.
Length = 584
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 493 IDRAEVETQITTTTLLENNDGSQTLIVTEKTETPEQAPSVKE 618
I+ + +T I TTT+ ++ DGS++ +V E T T +++E
Sbjct: 544 IEHGDTKT-IKTTTVTKHADGSESTLVQENTTTETVTTTLEE 584
>U41550-2|AAA83285.2| 301|Caenorhabditis elegans Hypothetical
protein R04A9.3 protein.
Length = 301
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = +1
Query: 190 EKIYDKHYRIWD----ETTNQSKNEPQIDTFKKEP--EIDTYQNESEIDTCKKETEIDTY 351
E+ Y KHY+ + ETT Q N ++ TFK +P + + + D + +ID+
Sbjct: 198 ERNYTKHYKTFGLLPKETTRQLSNGRELLTFKYQPPTTLTSIDDSENSDDDSDDEKIDSN 257
Query: 352 KNEPE 366
E E
Sbjct: 258 NAERE 262
>U21310-4|AAA62518.1| 165|Caenorhabditis elegans Hypothetical
protein F40H6.1 protein.
Length = 165
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -3
Query: 392 SGSCLGASISGSFLYVSISVSFLHVSISDSFWYVSISGSFLNVSICG 252
SG+ +G +I + + S ++S+ S W+ + G F N + CG
Sbjct: 109 SGTIIGTTILATISFAIAKDS--NMSMGSSMWFCLVGGVFFNGAACG 153
>Z81586-7|CAB04693.1| 359|Caenorhabditis elegans Hypothetical
protein T05F1.9 protein.
Length = 359
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 133 LNSELTL-ISNPDQEKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNES 309
LN E + I D FW + H+ +W + + +P D K EID +E
Sbjct: 297 LNCEFVMDIQRDDGMLASFWRREQSFHFVVWHDRHPIATLQPDPDLLLKLEEIDFASDED 356
Query: 310 E 312
+
Sbjct: 357 D 357
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 148 TLISNPDQEKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEI 315
T+ N + +KMDFW++ ++ + +I ++ + + F+K I + N EI
Sbjct: 181 TIEENDNGDKMDFWQRTFNLYMKIGSILIHRYGTDGTTEVFRK--YIPDFPNVREI 234
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +1
Query: 172 EKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESEIDTCKKETEIDTY 351
E D+W K++DK + T++ + K P I E +D + EI
Sbjct: 103 EDPDYWRKVFDKQTGTDVKLTDEQIEKIHNIATGKYPTIGYNPYEPFLDIFSSQKEIHPI 162
Query: 352 KNEPE 366
N PE
Sbjct: 163 DNRPE 167
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 148 TLISNPDQEKMDFWEKIY 201
T ISNPD +K+DF KIY
Sbjct: 317 TPISNPDPQKIDFMIKIY 334
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 148 TLISNPDQEKMDFWEKIY 201
T ISNPD +K+DF KIY
Sbjct: 353 TPISNPDPQKIDFMIKIY 370
>Z81069-3|CAB02989.1| 352|Caenorhabditis elegans Hypothetical
protein F25H9.3 protein.
Length = 352
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +1
Query: 196 IYDKHYRIWDETTNQSKNEPQ--IDTFKKEPEIDTYQN--ESEIDTCKKETEIDTYKN 357
++ HY + + T ++ N+P+ I P + Y + ++++D K ET+ D Y+N
Sbjct: 179 LHSFHYSTYCKCTTKNCNDPEAPIPYPISSPTVSCYTSGYDAKVDNAKYETDGDFYEN 236
>AL110487-16|CAH10818.1| 304|Caenorhabditis elegans Hypothetical
protein Y39E4B.3c protein.
Length = 304
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 514 TQITTTTLLENNDGSQTLIVTEKTETPEQ 600
T TT+T + DGS T+ + T TPEQ
Sbjct: 205 TPTTTSTTTASPDGSTTISPSSTTPTPEQ 233
>AL110487-15|CAH10817.1| 307|Caenorhabditis elegans Hypothetical
protein Y39E4B.3b protein.
Length = 307
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 514 TQITTTTLLENNDGSQTLIVTEKTETPEQ 600
T TT+T + DGS T+ + T TPEQ
Sbjct: 205 TPTTTSTTTASPDGSTTISPSSTTPTPEQ 233
>AL110487-14|CAB54432.1| 395|Caenorhabditis elegans Hypothetical
protein Y39E4B.3a protein.
Length = 395
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 514 TQITTTTLLENNDGSQTLIVTEKTETPEQ 600
T TT+T + DGS T+ + T TPEQ
Sbjct: 205 TPTTTSTTTASPDGSTTISPSSTTPTPEQ 233
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 TNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKM-NQKSIHAKKKQKS 343
TN TE M K K I SK + + K+ ++KS+ KKKQKS
Sbjct: 155 TNETEIAMMYGDKKKKYKKKISSKNKENCQNFKLLSEKSVR-KKKQKS 201
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/73 (19%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 191 RKSTTNTTESGMKRPTSLKTNHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQKS 370
R+S ++ + +R + + +H+S + K++++ ++K + + +KS ++ +QKS
Sbjct: 83 RRSMKSSRDRKSRRSSKDRKSHRSSNRKRDREDDVRDGSRKGVRDGRSRKSGKSRKSQKS 142
Query: 371 MR-PNMNRK*CPL 406
+ + +K C +
Sbjct: 143 QKSTKLEKKKCSI 155
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 257 KSIHSKKNQKSIHTKMNQKSI-HAKKKQKSIHT--KMNQKSMRPNMNRK*CPL 406
KSIH K + S K NQ S+ H +SIH ++K N N+K PL
Sbjct: 4 KSIHKKHQENSQQDK-NQFSVHHYLDPNQSIHALISCSEKKYEKNQNQKKNPL 55
>Z49207-4|CAA89073.1| 195|Caenorhabditis elegans Hypothetical
protein R07E3.7 protein.
Length = 195
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 154 ISNPDQEKMDFWEKIYDKHYRIWDETTNQSK 246
++ PD+ +DF +I++ H + + TN K
Sbjct: 131 VTTPDRPSIDFLNEIHESHAKTKESKTNDDK 161
>AL031629-3|CAA20976.1| 555|Caenorhabditis elegans Hypothetical
protein Y106G6D.3 protein.
Length = 555
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 194 KSTTNTTESGMKRPTSLKTN--HKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHTKMNQK 367
K + ++ SG+++ KT+ H S HSK K ++KS ++K +++ ++K
Sbjct: 488 KKSIKSSRSGIQQREVTKTSSKHSSKHSKAPSSK---KSSKKSSKKEQKSRALSNSSSKK 544
Query: 368 SMRPNMNR 391
S+ + N+
Sbjct: 545 SVGSHRNK 552
>AF099917-2|AAC68785.1| 235|Caenorhabditis elegans Hypothetical
protein F54D10.5 protein.
Length = 235
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +1
Query: 547 NDGSQTLIVTEKTETPEQAPSVKEMILEFSEPAQLESNEH---KPVND 681
ND ++TL VTE E E S+ E++ P++L S ++ +PVND
Sbjct: 93 NDLNRTLEVTEDAEVMENWVSIYELL----NPSELRSRKNGLTEPVND 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,244,827
Number of Sequences: 27780
Number of extensions: 351063
Number of successful extensions: 1145
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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