Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0627
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 28 0.075
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 27 0.23
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 24 1.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 24 1.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 24 1.6
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 24 1.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.7
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 6.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.5
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 8.6
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 8.6
AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alph... 21 8.6
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 8.6
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 8.6
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 28.3 bits (60), Expect = 0.075
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +1
Query: 160 NPDQEKMDFWEKIYDKHYRIWDETTNQSKN----EPQIDTFKKEPEIDTYQNESEIDTCK 327
N + K +EK++++ ++ +E TN+ +N E + +++K E E Y+ S+ + +
Sbjct: 9 NREYRKDRRYEKLHNEKEKLLEERTNRKRNSRSREREQNSYKNEREYRKYRETSK-ERSR 67
Query: 328 KETEIDTYKNEPEI 369
TE + EP+I
Sbjct: 68 DRTERER-SREPKI 80
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.6 bits (56), Expect = 0.23
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 160 NPDQEKMDFWEKIYDKHYRIWDETTNQSKNEPQIDTFKKEPEIDTYQNESE 312
N + K +EK++++ ++ +E TN+ +N + +E E ++Y+NE E
Sbjct: 9 NREYRKDRRYEKLHNEKEKLLEERTNRKRN-----SRSREREQNSYKNERE 54
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 294 CIDFWFFFECIDLWFVFRLVGRFIPDSVVFVVDFLP 187
C+ F FFECI + + F V RF D + ++ + P
Sbjct: 454 CLLFLMFFECIAISWAFG-VNRFY-DGIRDMIGYYP 487
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 294 CIDFWFFFECIDLWFVFRLVGRFIPDSVVFVVDFLP 187
C+ F FFECI + + F V RF D + ++ + P
Sbjct: 507 CLLFLMFFECIAISWAFG-VNRFY-DGIRDMIGYYP 540
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 371 SISGSFLYVSISVSFLHVSISDSFWYVSISGS--FLNVSICGSFLDW 237
S G V+ S+ + ++ +I+GS F+N+ + GS LDW
Sbjct: 642 SYIGVLTLVATSMPTYICYLGKAYLMYAIAGSQCFINIWLLGSRLDW 688
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 23.8 bits (49), Expect = 1.6
Identities = 7/34 (20%), Positives = 21/34 (61%)
Frame = +2
Query: 251 NHKSIHSKKNQKSIHTKMNQKSIHAKKKQKSIHT 352
NHKSI+ +++ K+ + + + +++++ H+
Sbjct: 50 NHKSIYHRQHSKNEQQRKEMEQMREREREQREHS 83
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 115 NLYCLNLNSELTLISNPDQEKM 180
N++ N NS++ ISN +Q K+
Sbjct: 528 NMFYNNFNSDIKSISNNEQVKV 549
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 115 NLYCLNLNSELTLISNPDQEKM 180
N++ N NS++ ISN +Q K+
Sbjct: 528 NMFYNNFNSDIKSISNNEQVKV 549
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 397 LFPVHVWAHRFLVHFCMYRFLFLFCMY 317
LF +++ FL+ FCM + + C Y
Sbjct: 89 LFVINLAISNFLMMFCMSPPMVINCYY 115
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.5
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 154 ISNPDQEKMDFWEKIYD 204
+ NP Q+ +D W +Y+
Sbjct: 616 VINPHQQHLDQWNWVYE 632
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 507 FGSVDLVRVTHDFCPLFGNAGLFVHDL 427
F D THD CP +AG H L
Sbjct: 52 FKHTDACCRTHDMCPDVMSAGESKHGL 78
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 507 FGSVDLVRVTHDFCPLFGNAGLFVHDL 427
F D THD CP +AG H L
Sbjct: 57 FKHTDACCRTHDMCPDVMSAGESKHGL 83
>AM420631-1|CAM06631.1| 153|Apis mellifera bursicon subunit alpha
protein precursor protein.
Length = 153
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 79 SGFRPVSGSQI*RISPSCRILQPGG 5
S + VSGS+I ++ SC Q G
Sbjct: 58 SSYLQVSGSKIWQMERSCMCCQESG 82
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 507 FGSVDLVRVTHDFCPLFGNAGLFVHDL 427
F D THD CP +AG H L
Sbjct: 57 FKHTDACCRTHDMCPDVMSAGESKHGL 83
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 51 WEPDTGRKPLFEHQLATG 104
W+ + RK + HQ ATG
Sbjct: 173 WQWNEERKQYYLHQFATG 190
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.4 bits (43), Expect = 8.6
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 82 LNTNWLPVTNDNLYCLNLNSE 144
L NWLPV LNL E
Sbjct: 434 LEKNWLPVHTSYKSGLNLEQE 454
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.311 0.130 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,421
Number of Sequences: 438
Number of extensions: 4968
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -