Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0625
(560 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024790-14|ABA61861.1| 417|Caenorhabditis elegans Hypothetical... 60 1e-09
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 36 0.020
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 32 0.32
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 30 0.99
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 30 0.99
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 30 0.99
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.3
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 28 5.3
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 28 5.3
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical pr... 27 7.0
U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosi... 27 7.0
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 27 9.2
M98552-7|AAK82925.2| 355|Caenorhabditis elegans Hypothetical pr... 27 9.2
>AC024790-14|ABA61861.1| 417|Caenorhabditis elegans Hypothetical
protein Y47D7A.16 protein.
Length = 417
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/54 (42%), Positives = 38/54 (70%)
Frame = +3
Query: 369 LLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQLANIGPILYGLL 530
L+ +G +W+G N ++++L LL +LPEGW LPS L VQ+A +GP++Y ++
Sbjct: 10 LVAIFGSSSWIGTNSVWMELSLLTAKLPEGWNLPSYLSAIVQIACLGPLIYSII 63
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 35.9 bits (79), Expect = 0.020
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 258 LPTHRLNEDKEISPCLVKEEGFNVRMWGAQRRV 356
LPTH++ ED+ I+P E V +W AQR V
Sbjct: 20 LPTHKMEEDRSITPFSSFAERLTVNLWHAQRNV 52
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 31.9 bits (69), Expect = 0.32
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -3
Query: 153 SSPLLLHDNARPHTARVAVLTLQEPGL 73
S LLLHDNARPHTA LQ G+
Sbjct: 207 SKLLLLHDNARPHTALKTRQKLQTLGI 233
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 138 LHDNARPHTARVAVLTLQEPGLT 70
LHDNARPH A+ LQ+ G T
Sbjct: 240 LHDNARPHVAKKTFQKLQDLGWT 262
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 138 LHDNARPHTARVAVLTLQEPGLT 70
LHDNARPH A+ LQ+ G T
Sbjct: 215 LHDNARPHVAKKTFQKLQDLGWT 237
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 138 LHDNARPHTARVAVLTLQEPGLT 70
LHDNARPH A+ LQ+ G T
Sbjct: 240 LHDNARPHVAKKTFQKLQDLGWT 262
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 1.3
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = -2
Query: 538 SRPSRPYRMGPMLASCTASTSEDGRAQPS-GSLSTSRGSCT*RPFTPSQVPM-PQQMSST 365
S+PS+P + P + +A +G AQPS ++ TS GS P P + + P + T
Sbjct: 469 SQPSQPKQTQPAQPTPSAPKIPEGPAQPSPNAVKTSYGSSPAAPRVPEMIEVAPGNVEKT 528
Query: 364 SSVT 353
T
Sbjct: 529 PDQT 532
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
protein F13B9.1c protein.
Length = 1609
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 395 GADAPTDEQHIERHASLSAPHPHVE 321
G+ P+ E ERH + +AP PHVE
Sbjct: 214 GSAPPSKEVTPERHFTAAAPAPHVE 238
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
protein F13B9.1b protein.
Length = 1614
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 395 GADAPTDEQHIERHASLSAPHPHVE 321
G+ P+ E ERH + +AP PHVE
Sbjct: 214 GSAPPSKEVTPERHFTAAAPAPHVE 238
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
protein F13B9.1a protein.
Length = 1632
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 395 GADAPTDEQHIERHASLSAPHPHVE 321
G+ P+ E ERH + +AP PHVE
Sbjct: 214 GSAPPSKEVTPERHFTAAAPAPHVE 238
>Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical
protein T07A5.3 protein.
Length = 544
Score = 27.5 bits (58), Expect = 7.0
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = +3
Query: 318 GFNVRMWGAQRRVTLDVLLICWGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQL 497
GFNV + R ++ I G+G GV G+ + + P+GW L +A+ +
Sbjct: 404 GFNVNHFDIAPRYAPILMGIANGLGAVAGVGGMVTN--TVTYQNPDGWKWVFLLAMAIDI 461
Query: 498 ANIGPILYGLLGRLRPHASD 557
+ L G + P A +
Sbjct: 462 FGVIFFLIFAKGDVLPWARE 481
>U61954-6|AAK29811.2| 459|Caenorhabditis elegans Sand endocytosis
protein familyprotein 1 protein.
Length = 459
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 365 IERHASLSAPHPHVEAFFFDETRGYFFIFV 276
+ R +SLS+ HPH+ F T+ F++V
Sbjct: 385 MRRSSSLSSLHPHLRTLFVRGTKHCLFVWV 414
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = -1
Query: 536 PAQQTVQNGPNVGELHGQHQRGRQGPALGQPLDEQR*LHVETVHSEPGADAPTDEQHIER 357
PA+ NGP V + H Q Q+ G A P ++ + + A A +Q +
Sbjct: 125 PAEYGFYNGPPVHQQHYQQQQQHYGAATSAPSSSYNVMYQQQEDTGIDAFAQFGQQSQQY 184
Query: 356 HAS 348
H S
Sbjct: 185 HPS 187
>M98552-7|AAK82925.2| 355|Caenorhabditis elegans Hypothetical
protein ZK370.7 protein.
Length = 355
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 381 WGIGTWLGVNGLYVQLPL-LVERLPEGWALPSSLVLAVQLA 500
W + LGV GLY+ L + ++ L + A S++L V L+
Sbjct: 283 WAVVILLGVGGLYISLVMRYLDNLYKSMASAVSIILVVVLS 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,304,209
Number of Sequences: 27780
Number of extensions: 283733
Number of successful extensions: 776
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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