Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0625
(560 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 38 7e-05
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 36 2e-04
L10430-1|AAA27731.1| 150|Apis mellifera transposase protein. 29 0.032
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.8
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 22 3.7
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 3.7
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 22 4.9
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 4.9
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 4.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 4.9
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 4.9
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 8.5
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 37.9 bits (84), Expect = 7e-05
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = -3
Query: 189 AFSVKQPRLMNRSSPLLLHDNARPHTARVAVLTLQEPG 76
A K+P L NR S + HDNARPHT+ V L E G
Sbjct: 104 AVEEKRPELTNRKSVVFHHDNARPHTSLVTRQKLLELG 141
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 36.3 bits (80), Expect = 2e-04
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -3
Query: 189 AFSVKQPRLMNRSSPLLLHDNARPHTARVAVLTLQEPG 76
A K+P L NR + HDNARPHT+ V L E G
Sbjct: 226 AVEEKRPELTNRKGVVFHHDNARPHTSLVTRQKLLELG 263
>L10430-1|AAA27731.1| 150|Apis mellifera transposase protein.
Length = 150
Score = 29.1 bits (62), Expect = 0.032
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -3
Query: 189 AFSVKQPRLMNRSSPLLLHDNARPHTARVAVLTLQEPG 76
A K+ L NR + HD+ARPHT V L E G
Sbjct: 105 AIEEKRFELTNRKGVVFHHDDARPHTYLVTRQKLLELG 142
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.6 bits (46), Expect = 2.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 311 RRRLQREDVGRSKTRDARCAAHL 379
R+R QRE G + R + A H+
Sbjct: 440 RKRRQREAAGNCRKRGEKIARHI 462
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 267 HRLNEDKEISPCLVKEEGFNVR 332
HR+ + +E+S L K GF +R
Sbjct: 275 HRIPQLQEVSEFLKKNTGFTLR 296
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 3.7
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 501 NIGPILYGLLGRLRPH 548
N GP+ G++G +PH
Sbjct: 899 NHGPVTAGVIGARKPH 914
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.9
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = +2
Query: 47 FY*SLVTGVKPGSCRVKTATRAV*GLALSWSNNGEDRFMSRGCFTL 184
F +++TG C V + S NG+ R + FTL
Sbjct: 98 FIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTL 143
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 178 ETAPTHESIFTI 143
+T PTH IFTI
Sbjct: 55 QTGPTHAPIFTI 66
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/39 (20%), Positives = 17/39 (43%)
Frame = +3
Query: 381 WGIGTWLGVNGLYVQLPLLVERLPEGWALPSSLVLAVQL 497
W + +G+ + +++ W L S L+ +QL
Sbjct: 114 WSWANYKDCSGIVSAYKIAIDKFDRLWVLDSGLINNIQL 152
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 4.9
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 362 ERHASLSAPHPHVEAFFFDETRGYF 288
E +A +A PH A FDE Y+
Sbjct: 771 EHYALYTAMAPHATASEFDEMSFYY 795
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 210 GHGQPRVRQH 239
GHG P V+QH
Sbjct: 274 GHGSPPVKQH 283
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.0 bits (42), Expect = 8.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 102 LLVLYEVSRYRGAIMVK 152
LLV YEV RY M++
Sbjct: 46 LLVFYEVFRYLELAMIR 62
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,102
Number of Sequences: 438
Number of extensions: 3205
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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