Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0624
(662 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical pr... 71 6e-13
AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical ... 66 2e-11
AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical ... 62 5e-10
AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical ... 39 0.003
U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 29 2.2
X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein. 29 2.2
U42845-1|AAA83599.1| 196|Caenorhabditis elegans Ribosomal prote... 29 2.2
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 29 2.9
AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical ... 29 3.9
Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical pr... 28 5.1
U40935-7|AAA81691.3| 338|Caenorhabditis elegans C.elegans homeo... 28 5.1
U01303-1|AAC46471.1| 338|Caenorhabditis elegans Ceh-20 protein. 28 5.1
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 28 5.1
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 28 5.1
Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF039050-5|AAC47938.1| 499|Caenorhabditis elegans Cytochrome p4... 28 6.8
Z68114-7|CAA92161.1| 317|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 27 9.0
AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transpor... 27 9.0
>U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical
protein F22A3.6a protein.
Length = 139
Score = 71.3 bits (167), Expect = 6e-13
Identities = 43/123 (34%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Frame = +2
Query: 155 VTEVCLGCICQAISGCKQGLQCEGE----TCGLFRITWGYWADAGKPTIN-GLSPDAPDA 319
V+ CL CIC SGCK + C + +CG ++I GY+ D G+PT G + +A A
Sbjct: 16 VSADCLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGETTEA--A 72
Query: 320 YSSCTVDPYCAAQTVQNYMKRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVNVF 499
+ C D CA V+NY R+ CNG G+ C H G GC Y N
Sbjct: 73 WKRCADDLNCATTCVENYYNRYKSQCNGLGMGACQIMSRNHNGGPRGCHNANTLAYWNGV 132
Query: 500 NQC 508
C
Sbjct: 133 KSC 135
>AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.3 protein.
Length = 139
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/118 (33%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Frame = +2
Query: 167 CLGCICQAISGCKQ---GLQCEGETCGLFRITWGYWADAGKPTI-NGLSPDAPDAYSSCT 334
CL CIC SGCK + +CG ++I Y+ D G+PT +G + +A A+ C
Sbjct: 20 CLHCICMRESGCKPIGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGETTEA--AWKRCA 77
Query: 335 VDPYCAAQTVQNYMKRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVNVFNQC 508
D CA V+NY R+ C G G C H G GC Y N C
Sbjct: 78 NDLSCATTCVENYYNRYKSQCAGTGQGACEVMARNHNGGPQGCKHSGTLGYWNGIKSC 135
>AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.2 protein.
Length = 139
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 167 CLGCICQAISGCKQGLQCEGE----TCGLFRITWGYWADAGKP-TINGLSPDAPDAYSSC 331
CL CIC SGCK + C + +CG ++I Y+ D G+P +G S + A+ C
Sbjct: 20 CLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIPYYEDCGQPGKKHGESTEV--AWKRC 76
Query: 332 TVDPYCAAQTVQNYMKRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVNVFNQC 508
D CA V+NY R+ +C G G C H G GC Y + C
Sbjct: 77 ADDLKCATNCVENYYNRYKHECAGTGQGACEVMARNHNGGPRGCHASGTLGYWKGVHSC 135
>AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical
protein C45G7.1 protein.
Length = 145
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +2
Query: 215 QCEGETC-GLFRITWGYWADAGKPTINGLSPDAPDAYSSCTVDPYCAAQTVQNYMKRFGQ 391
QC C G F I Y+ D G+P A+ C D CA + NY R+
Sbjct: 20 QCMHCMCLGNFVIKLPYYIDCGEPG-KQRGESTESAWKRCADDLDCAETCMMNYYHRYKS 78
Query: 392 DCNGDGVVNC 421
CNG G+ C
Sbjct: 79 QCNGLGMSEC 88
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 347 CAAQTVQNYMKRFGQDCNGDGVVNCYDYMAIHKKGGYGCTGELPFNYVNVFNQC 508
C A + QNY R+ C+G G+ C + H G GC Y +C
Sbjct: 88 CEA-SFQNYYHRYKSQCDGLGMGECEVFARNHNGGPTGCRNPGTLEYWQSIQKC 140
>U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical
protein C55F2.2 protein.
Length = 159
Score = 35.5 bits (78), Expect = 0.034
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Frame = +2
Query: 167 CLGCICQAISGCKQGLQCEGET-----CGLFRITWGYWADAGKPTINGLSPDAPDAYSSC 331
CL +C SGC L C + CG FR+ + +P + +A+ +C
Sbjct: 31 CLLAMCDQDSGCVP-LGCSVDQFDRIGCGYFRLNIYQFQQCYQPGKKDEDTEN-EAWMNC 88
Query: 332 TVDPYCAAQTVQNYMKRFGQDCNGDGVVNCYDYMAIHKKGGYGC 463
D C+A ++ +F C G C IH G GC
Sbjct: 89 AQDYQCSASCIRTLATKFRVKCYGKS--ECETIARIHDGGANGC 130
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 29.5 bits (63), Expect = 2.2
Identities = 27/86 (31%), Positives = 34/86 (39%)
Frame = +3
Query: 273 PENPPSMVSHLTLRMPTLAAL*TRTAPRRPSKTT*KDLARTATATEWSTAMTTWRSTRRE 452
P N S +PT + T P PSKTT T T TA TT ST
Sbjct: 322 PANTKSSAHLDNSDVPTTTVQTSTTVPTTPSKTT-ATTTTTPKPTTTETA-TTSSSTTTV 379
Query: 453 ATGAPANFLLTM*TCLTSASMSSRST 530
T P T T+AS ++++T
Sbjct: 380 TTQKPTTVTSTTTLPSTTASTTTKTT 405
>X91045-1|CAA62505.1| 693|Caenorhabditis elegans let-653 protein.
Length = 693
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/83 (30%), Positives = 35/83 (42%)
Frame = +3
Query: 282 PPSMVSHLTLRMPTLAAL*TRTAPRRPSKTT*KDLARTATATEWSTAMTTWRSTRREATG 461
P + + + +PT + T P PSKTT T T TA TT ST T
Sbjct: 365 PLTTTTEVISDVPTTTVQTSTTVPTTPSKTT-ATTTTTPKPTTTETA-TTSSSTTTVTTQ 422
Query: 462 APANFLLTM*TCLTSASMSSRST 530
P T T+AS ++++T
Sbjct: 423 KPTTVTSTTTLPSTTASTTTKTT 445
>U42845-1|AAA83599.1| 196|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 11.2 protein.
Length = 196
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 502 VKHVYIVKRKFAGAPVASLLVDRHVVIAVDHSVAVAVLAKSFHVVLD--GLRGAVRVYSA 329
VK + K F+ V H+ + + + ++ + F+VVLD G R A R +
Sbjct: 96 VKEYELYKENFSDTGNFGFGVQEHIDLGIKYDPSIGIYGMDFYVVLDRAGRRIAKRRRAP 155
Query: 328 ARVG 317
RVG
Sbjct: 156 GRVG 159
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/72 (33%), Positives = 31/72 (43%)
Frame = +3
Query: 315 MPTLAAL*TRTAPRRPSKTT*KDLARTATATEWSTAMTTWRSTRREATGAPANFLLTM*T 494
+PT + T P PSKTT T T TA TT ST T P T
Sbjct: 495 VPTTTVQTSTTVPTTPSKTT-ATTTTTPKPTTTETA-TTSSSTTTVTTQKPTTVTSTTTL 552
Query: 495 CLTSASMSSRST 530
T+AS ++++T
Sbjct: 553 PSTTASTTTKTT 564
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 42 NNIFCLCISDAMASAVIRFVRCCWLPESVSPM 137
++++ L SD + R CCW P+S P+
Sbjct: 178 SSVYSLARSDMSNEPLCRICHCCWPPDSNDPL 209
>AC093703-3|AAL00866.2| 1319|Caenorhabditis elegans Hypothetical
protein Y20F4.4 protein.
Length = 1319
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -1
Query: 167 TLPSQGGVPKHRRNRLRQPTATHKPDHSRSHCVGNTQTKNIIK 39
TLP G P H L P +PD R+ NT I +
Sbjct: 460 TLPFGGSTPNHEPMDLEDPVPPPRPDRPRASTPLNTPVSQITR 502
>Z37139-9|CAA85493.1| 396|Caenorhabditis elegans Hypothetical
protein C14B1.5 protein.
Length = 396
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Frame = +2
Query: 320 YSSCTVDPYCAAQTVQNYMKRFGQDC-----NGDGVVNCYDYMAIH 442
Y +C VD Y A + + +G C N DG+ Y ++ IH
Sbjct: 86 YGACCVDDYTAKSMGCDLLVHYGHSCLVPIQNTDGIAMLYVFVNIH 131
>U40935-7|AAA81691.3| 338|Caenorhabditis elegans C.elegans homeobox
protein 20 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -2
Query: 634 KIILVLMETMTDYHKAVVGYSNLVGFLIR-QSYLRSVLREDIDALVKHVYIVKRKFAGAP 458
+I ++ E + Y +A ++ V L++ QS +R + ++I+ +V YI++RKF G
Sbjct: 111 QIRVLYNEELRKYEEACNEFTQHVRSLLKDQSQVRPIAHKEIERMV---YIIQRKFNGIQ 167
Query: 457 V 455
V
Sbjct: 168 V 168
>U01303-1|AAC46471.1| 338|Caenorhabditis elegans Ceh-20 protein.
Length = 338
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = -2
Query: 634 KIILVLMETMTDYHKAVVGYSNLVGFLIR-QSYLRSVLREDIDALVKHVYIVKRKFAGAP 458
+I ++ E + Y +A ++ V L++ QS +R + ++I+ +V YI++RKF G
Sbjct: 111 QIRVLYNEELRKYEEACNEFTQHVRSLLKDQSQVRPIAHKEIERMV---YIIQRKFNGIQ 167
Query: 457 V 455
V
Sbjct: 168 V 168
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = +2
Query: 74 NGFGCD----QVCALLLVAGVCFADVS-ELPPVTEVCLGCIC--QAISGCKQGLQCEGET 232
N GCD QVC VC ++ PVT+VC G IC + + C CE
Sbjct: 635 NHNGCDRSLNQVCQQKNGKFVCACPAGFDIHPVTKVCGGDICNPEIATSCPDPEICEKTP 694
Query: 233 CGLFRIT 253
G +R T
Sbjct: 695 FGNWRCT 701
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 28.3 bits (60), Expect = 5.1
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Frame = +2
Query: 74 NGFGCD----QVCALLLVAGVCFADVS-ELPPVTEVCLGCIC--QAISGCKQGLQCEGET 232
N GCD QVC VC ++ PVT+VC G IC + + C CE
Sbjct: 635 NHNGCDRSLNQVCQQKNGKFVCACPAGFDIHPVTKVCGGDICNPEIATSCPDPEICEKTP 694
Query: 233 CGLFRIT 253
G +R T
Sbjct: 695 FGNWRCT 701
>Z83237-2|CAB05789.1| 258|Caenorhabditis elegans Hypothetical
protein R06B9.2 protein.
Length = 258
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 339 TRTAPRRPSKTT*KDLARTATATEWSTAMTTWRSTRREATGAPANF 476
T+T + S+T + TATA TA+ WR T + A P +
Sbjct: 57 TKTNSKGESETKTHTVHYTATAKHLDTAVPLWRKTDKAARLLPGKY 102
>AF039050-5|AAC47938.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 34A8 protein.
Length = 499
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = -3
Query: 201 HPEIAWQMQPRHTSVTGGS---SETSAKQTPATNSN 103
HPE+ +++ T VTGG+ S T +TP N+N
Sbjct: 327 HPEVVEKLRKELTEVTGGTRGVSLTDRTKTPYLNAN 362
>Z68114-7|CAA92161.1| 317|Caenorhabditis elegans Hypothetical
protein F17A2.10 protein.
Length = 317
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 34 HFLIIFFVCVFPTQWLRL 87
+F IIFF+ VFPTQ L L
Sbjct: 8 YFYIIFFLIVFPTQLLLL 25
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 27.5 bits (58), Expect = 9.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 545 LSNQKPDQITVTYHCFMVIRHSFHQHQYYFYDESVT 652
L+ K D+I Y CF + FH + + D +VT
Sbjct: 506 LAESKKDEIRKLYDCFKNAKRRFHPNNAFGEDGNVT 541
>AF000264-2|AAC71121.1| 761|Caenorhabditis elegans Half transporter
(pgp related)protein 2 protein.
Length = 761
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = -2
Query: 493 VYIVKRKFAG---APVASLLVDRHVVIAVDHSVAVAVLAKSFHVVLDGLRGAVRVYSAAR 323
VY + R F A V S +V++ + A+ HS+ V + + GLRG Y+ A
Sbjct: 208 VYALARVFIPNYTAQVISDIVNKRGIQALIHSIIVLTCLTATSSLFGGLRGGCFDYATAL 267
Query: 322 VGIR 311
V +R
Sbjct: 268 VTLR 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,497,298
Number of Sequences: 27780
Number of extensions: 379723
Number of successful extensions: 1023
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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