Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0621
         (666 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E2C0B1 Cluster: conserved hypothetical protein; ...    44   0.004
UniRef50_UPI00005A9706 Cluster: PREDICTED: hypothetical protein ...    43   0.006
UniRef50_Q6BIA6 Cluster: Similarities with CA2492|IPF7224 Candid...    34   3.5  
UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;...    33   4.7  
UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185...    33   6.2  
UniRef50_P90550 Cluster: 39 kDa antigen; n=1; Leishmania donovan...    33   8.2  

>UniRef50_UPI0000E2C0B1 Cluster: conserved hypothetical protein;
           n=1; Aspergillus terreus NIH2624|Rep: conserved
           hypothetical protein - Aspergillus terreus NIH2624
          Length = 127

 Score = 43.6 bits (98), Expect = 0.004
 Identities = 18/25 (72%), Positives = 20/25 (80%)
 Frame = -2

Query: 179 HTIQQTLMILPQVPLRKPCYDFYFL 105
           H    ++MILPQV LRKPCYDFYFL
Sbjct: 103 HKDPHSVMILPQVHLRKPCYDFYFL 127


>UniRef50_UPI00005A9706 Cluster: PREDICTED: hypothetical protein
           XP_860064; n=1; Canis lupus familiaris|Rep: PREDICTED:
           hypothetical protein XP_860064 - Canis familiaris
          Length = 221

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 161 LMILPQVPLRKPCYDFYFL 105
           LMILPQV LRKPCYDFYFL
Sbjct: 203 LMILPQVHLRKPCYDFYFL 221


>UniRef50_Q6BIA6 Cluster: Similarities with CA2492|IPF7224 Candida
           albicans IPF7224; n=1; Debaryomyces hansenii|Rep:
           Similarities with CA2492|IPF7224 Candida albicans
           IPF7224 - Debaryomyces hansenii (Yeast) (Torulaspora
           hansenii)
          Length = 990

 Score = 33.9 bits (74), Expect = 3.5
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +2

Query: 68  RRCWEVDQT*SFRGSKSRNKVSVGEPAEGSLTFVVLCVICKYFIYLFIYIYACIHSIVLN 247
           R+ W ++   SF     +NK+SV +  E ++T +  C+IC Y  Y+  Y +   ++I  N
Sbjct: 311 RKDWFINHLISFNNPNKKNKISVSKIDELNITLI--CLICYY--YVPEYYHQSNNTITKN 366

Query: 248 F 250
           F
Sbjct: 367 F 367


>UniRef50_UPI0001560201 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 187

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 168 LYCV*YVNI-LFIYLYIYTHAYIRSFLIFIVY 260
           +Y   Y+ I ++IY YIYTH YI ++L   +Y
Sbjct: 89  IYIYPYIYIYIYIYTYIYTHIYICTYLYIYIY 120


>UniRef50_Q972E3 Cluster: Putative uncharacterized protein ST1185;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein ST1185 - Sulfolobus tokodaii
          Length = 109

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = -2

Query: 158 MILPQVPLRKPCYDF 114
           MI PQVPLR PCYDF
Sbjct: 1   MIQPQVPLRLPCYDF 15


>UniRef50_P90550 Cluster: 39 kDa antigen; n=1; Leishmania
           donovani|Rep: 39 kDa antigen - Leishmania donovani
          Length = 322

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
 Frame = +3

Query: 195 LFIYLYIYTHAYIRSFLIFIVYPISHA-----LARVC 290
           ++IY+YIY H    S LI I+ P SH+     LARVC
Sbjct: 158 IYIYIYIYIHVIYTSTLIHII-PASHSTFCAVLARVC 193


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,560,860
Number of Sequences: 1657284
Number of extensions: 9059168
Number of successful extensions: 29206
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28512
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)