Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0620
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z73098-8|CAA97334.2| 303|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 31 0.72
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z93383-14|CAB07631.2| 279|Caenorhabditis elegans Hypothetical p... 29 2.2
Z70270-11|CAJ80821.1| 606|Caenorhabditis elegans Hypothetical p... 29 2.2
Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical p... 29 2.2
Z68215-18|CAJ80818.1| 606|Caenorhabditis elegans Hypothetical p... 29 2.2
Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical p... 29 2.2
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 28 5.1
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 28 5.1
AL032663-2|CAA21759.1| 94|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z72511-2|CAA96656.1| 413|Caenorhabditis elegans Hypothetical
protein F55A11.2 protein.
Length = 413
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/64 (40%), Positives = 36/64 (56%)
Frame = +1
Query: 235 MASRDRTSEFISTVRSLQGRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKNITSTYTKL 414
M SRDRTSEF +T +S + + +R K +L QF +AK I K ++ T K+
Sbjct: 107 MPSRDRTSEFRATAKSYEMKAAANG-IRPQPKHEMLSESVQFNQLAKRIGKELSQTCAKM 165
Query: 415 EKLA 426
EKLA
Sbjct: 166 EKLA 169
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +2
Query: 434 AKRKSLFDDRPTEIQELTYIIKGDLNSLNQQIARLGEMPRGXXXXXXXXXXXXL-----A 598
AK+KS +++R ++I L+ I+K D+ LN+QI +L E + +
Sbjct: 172 AKKKSCYEER-SQIDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNMKNQNSGHIQLVVVG 230
Query: 599 LQSRLASMSNQFKQVLEV 652
LQS+LA++ ++ VLE+
Sbjct: 231 LQSKLANVGKDYQSVLEI 248
>Z73098-8|CAA97334.2| 303|Caenorhabditis elegans Hypothetical
protein T21C9.7 protein.
Length = 303
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -1
Query: 395 VIFLLITFAILMNWE*VSNTAAFLSSLTVGLFKKRPWRLRTVEMNSLV 252
+I ++I F ++M W +N A F+ S T+G F + T +NSLV
Sbjct: 135 LIMIVIIFPMIMTWPIATNNAYFIYSPTLGGFATKTVANSTEVLNSLV 182
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 31.1 bits (67), Expect = 0.72
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
Frame = +1
Query: 58 TERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVFKFLEEFVFEPVM 237
TE E+ +DS + + S E+ S SKS + SS K +
Sbjct: 212 TESSFESSSDSSSTSESSTSSESSSSASESESESKSESQVSSSKTSTSKASSSKAYGSDF 271
Query: 238 ASRDRTSEFISTVRSLQGRFLNKP--TVRDDRKAA 336
S +S ST+ + + L+KP T + D+K A
Sbjct: 272 ESEKSSSSSASTISKVTPKKLDKPQKTKKPDKKRA 306
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 4/94 (4%)
Frame = +1
Query: 43 RNIGVTERLLETETDSYNKLDKK--GVHYGESRPYENSSNSKST--LILKSSDQDVFKFL 210
R++ + + E E + N+ G G++ P E SS+S ++ L + F
Sbjct: 479 RDVSNSNSVKEVEEINENEFGNSSFGESDGKTTPLETSSSSSTSQRLTTTTKSSTTSPFA 538
Query: 211 EEFVFEPVMASRDRTSEFISTVRSLQGRFLNKPT 312
FVF + R +S +ST S KPT
Sbjct: 539 TRFVFSTRVTFRPVSSTVVSTKSSTTSSTTTKPT 572
>Z93383-14|CAB07631.2| 279|Caenorhabditis elegans Hypothetical
protein F54B8.12 protein.
Length = 279
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 175 ESMLIWNLMSSRKAAIPRNEHLSYL 101
ES+++W L+SS+K P N LS L
Sbjct: 255 ESVILWKLLSSKKKVSPNNIRLSNL 279
>Z70270-11|CAJ80821.1| 606|Caenorhabditis elegans Hypothetical
protein C53B4.8b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 FLNKPTVRDDRKAAVLETYSQFMSMAKVI-SKNITSTYTKLEKL 423
+ P +++++K++V E +A + +KN+TS+Y+ L+KL
Sbjct: 247 YAKMPDLKENKKSSVQEFTKMIRELAHIKPTKNMTSSYSNLKKL 290
>Z70270-10|CAA94231.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 FLNKPTVRDDRKAAVLETYSQFMSMAKVI-SKNITSTYTKLEKL 423
+ P +++++K++V E +A + +KN+TS+Y+ L+KL
Sbjct: 247 YAKMPDLKENKKSSVQEFTKMIRELAHIKPTKNMTSSYSNLKKL 290
>Z68215-18|CAJ80818.1| 606|Caenorhabditis elegans Hypothetical
protein C53B4.8b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 FLNKPTVRDDRKAAVLETYSQFMSMAKVI-SKNITSTYTKLEKL 423
+ P +++++K++V E +A + +KN+TS+Y+ L+KL
Sbjct: 247 YAKMPDLKENKKSSVQEFTKMIRELAHIKPTKNMTSSYSNLKKL 290
>Z68215-17|CAA92458.1| 726|Caenorhabditis elegans Hypothetical
protein C53B4.8a protein.
Length = 726
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 295 FLNKPTVRDDRKAAVLETYSQFMSMAKVI-SKNITSTYTKLEKL 423
+ P +++++K++V E +A + +KN+TS+Y+ L+KL
Sbjct: 247 YAKMPDLKENKKSSVQEFTKMIRELAHIKPTKNMTSSYSNLKKL 290
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 13 EDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQ 192
E++ + PR N G + + N++D+ G ++ E + N S D
Sbjct: 709 EEHEKVTPRNENGGKNGSVKRVAVEEINEVDEPKEVTGRTQETELTDNEDI-----SEDS 763
Query: 193 DVFKFLEEFVF 225
DV K +EE +F
Sbjct: 764 DVKKIMEETIF 774
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +1
Query: 13 EDYNAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQ 192
E++ + PR N G + + N++D+ G ++ E + N S D
Sbjct: 709 EEHEKVTPRNENGGKNGSVKRVAVEEINEVDEPKEVTGRTQETELTDNEDI-----SEDS 763
Query: 193 DVFKFLEEFVF 225
DV K +EE +F
Sbjct: 764 DVKKIMEETIF 774
>AL032663-2|CAA21759.1| 94|Caenorhabditis elegans Hypothetical
protein Y75B12B.3 protein.
Length = 94
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +1
Query: 211 EEFVFEPVMASRDRTSEFISTVRSLQGRFLNKPTVRDDRKAAVLETYSQFMSMAKVISKN 390
E+ E + + + + + L + +N P V D++K+ LE + + K
Sbjct: 9 EKLRLENIKKIYESSKSGYESAKQLYEQQVNNPEVSDEQKSENLEKLKESRGDLDNLQKK 68
Query: 391 ITSTYTKLEKLALVG 435
I K+E L+ +G
Sbjct: 69 IVELQAKIENLSKLG 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,102,167
Number of Sequences: 27780
Number of extensions: 243281
Number of successful extensions: 652
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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