Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0620
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.21 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   4.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   4.5  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    22   4.5  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    22   4.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   4.5  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    21   7.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   7.8  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   7.8  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 22/101 (21%), Positives = 45/101 (44%)
 Frame = +1

Query: 22  NAMLPRRRNIGVTERLLETETDSYNKLDKKGVHYGESRPYENSSNSKSTLILKSSDQDVF 201
           N  + R+R +G+ E     E ++ + L    +  G  R ++  +   + + +KS  +   
Sbjct: 106 NTQITRKRRVGIVENQYAVENNTGSSL--CDLVQGLERLFDEKNAGNNKITMKSKKE--- 160

Query: 202 KFLEEFVFEPVMASRDRTSEFISTVRSLQGRFLNKPTVRDD 324
           +  EE + +PV    + T +   T+R    R L+K    D+
Sbjct: 161 QNAEEDIVDPV--EENETYDEFDTIRIPIVRSLSKSPPNDE 199


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 410 NWKS*PWLAKRKSLFDDRPTEI 475
           N +S P    + SL DD PTE+
Sbjct: 261 NERSTPRSHAKPSLIDDEPTEV 282


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 410 NWKS*PWLAKRKSLFDDRPTEI 475
           N +S P    + SL DD PTE+
Sbjct: 261 NERSTPRSHAKPSLIDDEPTEV 282


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 443 KSLFDDRPTEIQELTYIIKGDLNSLNQQIARL 538
           K LFD+    IQ +  IIK     + + I R+
Sbjct: 49  KDLFDNVHNHIQNIFKIIKSTNEKITRYIIRM 80


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 443 KSLFDDRPTEIQELTYIIKGDLNSLNQQIARL 538
           K LFD+    IQ +  IIK     + + I R+
Sbjct: 32  KDLFDNVHNHIQNIFKIIKSTNEKITRYIIRM 63


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 410 NWKS*PWLAKRKSLFDDRPTEI 475
           N +S P    + SL DD PTE+
Sbjct: 261 NERSTPRSHAKPSLIDDEPTEV 282


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
          homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 19 YNAMLPRRRNIGVTERLLETE 81
          YN  L RRR I +   L  TE
Sbjct: 29 YNRYLTRRRRIEIAHALCLTE 49


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 19  YNAMLPRRRNIGVTERLLETE 81
           YN  L RRR I +   L  TE
Sbjct: 291 YNRYLTRRRRIEIAHALCLTE 311


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 226 EPVMASRDRTSEFISTVRSLQGRFL 300
           EP +  +  T EF+ST+  L  +F+
Sbjct: 21  EPSVMLKIWTEEFLSTILRLDPKFI 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,181
Number of Sequences: 438
Number of extensions: 2982
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)