Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0619
         (412 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2VKC2 Cluster: PE-PGRS family protein; n=1; Mycobacter...    35   0.74 
UniRef50_O94451 Cluster: E3 SUMO-protein ligase pli1; n=1; Schiz...    34   1.3  
UniRef50_UPI0001555F5D Cluster: PREDICTED: similar to Wnt3a, par...    32   4.0  
UniRef50_Q69NE0 Cluster: BRI1-KD interacting protein 120; n=7; E...    32   5.2  
UniRef50_UPI0000E8153F Cluster: PREDICTED: hypothetical protein;...    31   6.9  
UniRef50_A2QWM7 Cluster: Similarity partially corresponds to ser...    31   6.9  
UniRef50_A1CP66 Cluster: DUF292 domian protein; n=8; Trichocomac...    31   6.9  
UniRef50_UPI0000E8258E Cluster: PREDICTED: similar to cardiomyop...    31   9.1  
UniRef50_A7QIN6 Cluster: Chromosome chr9 scaffold_104, whole gen...    31   9.1  
UniRef50_A4S846 Cluster: Predicted protein; n=1; Ostreococcus lu...    31   9.1  
UniRef50_A5DIQ9 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  

>UniRef50_A2VKC2 Cluster: PE-PGRS family protein; n=1; Mycobacterium
           tuberculosis C|Rep: PE-PGRS family protein -
           Mycobacterium tuberculosis C
          Length = 83

 Score = 34.7 bits (76), Expect = 0.74
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -2

Query: 240 LLSLWLSARTRFSYALSSPVVVDR*YHFDFRHRSRRCC--FRKLPTRGPKRWRRVPSTCP 67
           +L+ W   R R S+ ++SP  +     +  R+R        R  P R  + WRR P+ CP
Sbjct: 14  ILTFW---RCRMSFLIASPEALAATATYVDRYRFGNAARRTRSRPPRQQRSWRRGPTRCP 70

Query: 66  PSWR*CAML 40
           P  + C+ L
Sbjct: 71  PPSQRCSAL 79


>UniRef50_O94451 Cluster: E3 SUMO-protein ligase pli1; n=1;
           Schizosaccharomyces pombe|Rep: E3 SUMO-protein ligase
           pli1 - Schizosaccharomyces pombe (Fission yeast)
          Length = 727

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = +3

Query: 264 DGDGVSTSIHNTPERPTKSERRSSATPPLDSETPEKILDRRLSKDKKSV 410
           DG+G+ST  + + ++PT+     ++ PP   +    ++D  +S D ++V
Sbjct: 411 DGEGISTMANKSNDQPTRRASTHNSGPPAKRKRESLVIDLTISDDDENV 459


>UniRef50_UPI0001555F5D Cluster: PREDICTED: similar to Wnt3a,
           partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to Wnt3a, partial - Ornithorhynchus anatinus
          Length = 490

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -2

Query: 117 LPTRGPKRWRRVPSTC-PPSWR 55
           LP RG +RW R+P T  PP WR
Sbjct: 14  LPRRGGRRWGRLPPTLPPPDWR 35


>UniRef50_Q69NE0 Cluster: BRI1-KD interacting protein 120; n=7;
           Eukaryota|Rep: BRI1-KD interacting protein 120 - Oryza
           sativa subsp. japonica (Rice)
          Length = 224

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +3

Query: 264 DGDGVSTSIHNTPERPTKSERRSSATPPLDSETPE 368
           +G+GVS+S      +P+ S+  SSA PP     PE
Sbjct: 160 EGEGVSSSEQKNTAKPSDSQGTSSARPPAPMRIPE 194


>UniRef50_UPI0000E8153F Cluster: PREDICTED: hypothetical protein; n=1;
            Gallus gallus|Rep: PREDICTED: hypothetical protein -
            Gallus gallus
          Length = 2027

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 144  RSRRCCFRKLPTRGPKRWR-RVPSTCPPSW 58
            RS R  F + P R PK WR R+ ++C PS+
Sbjct: 1982 RSMRTXFWRAPCRSPKTWRQRLITSCTPSY 2011


>UniRef50_A2QWM7 Cluster: Similarity partially corresponds to serine
           repeats; n=1; Aspergillus niger|Rep: Similarity
           partially corresponds to serine repeats - Aspergillus
           niger
          Length = 884

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = +3

Query: 120 YESSSGESDDENQNDISDQQLQEMIRRKKIEFXXXXXXXXXXXXXXXXDGDGVS-TSIHN 296
           Y  S  E DDE+ NDIS Q  QEM+  + +                  D    S +S H 
Sbjct: 208 YSLSDAEHDDED-NDISSQSDQEMLDGEDLASEVELFSNIDERTQPSIDRPSSSPSSSHE 266

Query: 297 TPERP--TKSERRSSATPPLDSETPE 368
           TP R   T+  R  +A+ P+ +E  E
Sbjct: 267 TPGRKLNTQPVRDIAASEPISTELIE 292


>UniRef50_A1CP66 Cluster: DUF292 domian protein; n=8;
           Trichocomaceae|Rep: DUF292 domian protein - Aspergillus
           clavatus
          Length = 401

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 264 DGDGVSTSIHNTPERPTKSE-RRSSATPPLDSETPEK 371
           DGDG   +I +TP RPT +E RR+S    L+  TP +
Sbjct: 297 DGDG-DAAIPSTPSRPTLAEARRASEASELNKATPPR 332


>UniRef50_UPI0000E8258E Cluster: PREDICTED: similar to cardiomyopathy
            associated 5; n=2; Gallus gallus|Rep: PREDICTED: similar
            to cardiomyopathy associated 5 - Gallus gallus
          Length = 4207

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 253  EPNVTVTEYQHQSTTHQRGLRNRSDVLQQHRL*IAKHPKK 372
            EP ++ +E +H   +H  G  N+SD+L Q  + I+   +K
Sbjct: 1492 EPEISQSEARHSDLSHSTGETNKSDLLDQKHIKISVDREK 1531


>UniRef50_A7QIN6 Cluster: Chromosome chr9 scaffold_104, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr9 scaffold_104, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 324

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 297 TPERPTKSERRSSATPPLDSETPEKILDRRLSKDKK 404
           TP R  +   ++ ATPP +SE P+K   R+ S  KK
Sbjct: 73  TPRRSARISEKAKATPPAESEPPKK-RGRKSSGSKK 107


>UniRef50_A4S846 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 645

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +3

Query: 123 ESSSGESDDENQNDISDQQLQEMIRRK 203
           E  +G+SDDEN  D  DQ L EM   K
Sbjct: 80  EEEAGDSDDENAGDEKDQLLDEMSELK 106


>UniRef50_A5DIQ9 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 696

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 291 HNTPERPTKSERRSSATPPLDSETPEKILDRRLSKDKKSV 410
           +N P RPT +    S  PP  S+ P + +   + +DK  +
Sbjct: 20  NNIPHRPTSTPANGSKLPPKPSKVPFQAMRSEVDRDKNDI 59


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,548,863
Number of Sequences: 1657284
Number of extensions: 5925240
Number of successful extensions: 23507
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 22374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23478
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)