Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0619
         (412 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.67 
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   4.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   8.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   8.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 0.67
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -1

Query: 37   LVPNSCSPGIH 5
            LVP +C+PG+H
Sbjct: 1229 LVPQNCAPGLH 1239


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 309 ASLVCCGLMLILRHRHVR 256
           ++ +C  LMLI RH  V+
Sbjct: 2   SAALCFALMLIARHSEVQ 19


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 144 RSRRCCF 124
           RSRRCC+
Sbjct: 611 RSRRCCY 617


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -2

Query: 144 RSRRCCF 124
           RSRRCC+
Sbjct: 503 RSRRCCY 509


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 300 VCCGLMLILRHRHVR 256
           +C  LML+  HR V+
Sbjct: 307 ICYTLMLLANHREVQ 321


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 300 VCCGLMLILRHRHVR 256
           +C  LML+  HR V+
Sbjct: 307 ICYTLMLLANHREVQ 321


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,559
Number of Sequences: 336
Number of extensions: 1318
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8963165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)