Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0619
         (412 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         26   0.62 
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    24   1.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   3.3  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   4.3  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 25.8 bits (54), Expect = 0.62
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 117 LPTRGPKRWRRVPSTCPPSWR 55
           L TRG +RW R P++C PS R
Sbjct: 19  LTTRG-RRWPRPPTSCWPSRR 38


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = -2

Query: 222 SARTRFSYALSSPVVVDR*YHFD-FRHRSRR---CCFRKLPTRGPKRW 91
           S RTR SY+    + +++ +HF+ + +R RR       KL  R  K W
Sbjct: 6   SKRTRQSYSRHQTIELEKEFHFNRYLNRRRRIEIASMLKLTERQIKIW 53


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 3.3
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +3

Query: 288  IHNTPERPTKSE-RRSSATPPLDSETPEK 371
            +HN   R  +   RRS  TPP    TP +
Sbjct: 1114 LHNEANRAYRQRNRRSQPTPPAPPPTPRE 1142


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -2

Query: 150 RHRSRRCCFRKLPTRGPKRWRRVPSTCPPSW 58
           R RS R   R    R P   RR  ST P SW
Sbjct: 258 RRRSPRSGGRWPSCRSPPARRRSRSTRPTSW 288


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,195
Number of Sequences: 2352
Number of extensions: 6045
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 33349914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)