Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0619
(412 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ138800-1|ABA86406.1| 861|Drosophila melanogaster CG14514 prot... 29 3.2
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro... 29 3.2
AY089391-1|AAL90129.1| 538|Drosophila melanogaster AT21495p pro... 29 3.2
AY069837-1|AAL39982.1| 874|Drosophila melanogaster SD08060p pro... 29 3.2
AJ389385-1|CAB52135.1| 378|Drosophila melanogaster Nucleotide e... 29 3.2
AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant ... 29 3.2
AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein. 29 3.2
AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide e... 29 3.2
AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair e... 29 3.2
AE014297-4357|AAF56879.1| 872|Drosophila melanogaster CG14514-P... 29 3.2
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P... 29 3.2
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P... 29 3.2
AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-P... 29 3.2
AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-P... 29 3.2
AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-P... 29 3.2
AE014134-428|AAF51242.3| 538|Drosophila melanogaster CG18559-PA... 29 3.2
Z98269-5|CAB10973.1| 1741|Drosophila melanogaster EG:87B1.2,FBgn... 28 4.2
U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel siste... 28 4.2
AY119606-1|AAM50260.1| 1108|Drosophila melanogaster LD29979p pro... 28 4.2
AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,... 28 4.2
BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p pro... 27 9.7
BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p pro... 27 9.7
AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcriptio... 27 9.7
AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptio... 27 9.7
AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptio... 27 9.7
AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA... 27 9.7
AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD... 27 9.7
AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA... 27 9.7
AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC... 27 9.7
AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB... 27 9.7
>DQ138800-1|ABA86406.1| 861|Drosophila melanogaster CG14514
protein.
Length = 861
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 285 SIHNTPERPTKSERRSSATPPLDSETPEKILDRRLSKDKKS 407
S+ T + SE + + P ETP ++L RRL++++++
Sbjct: 70 SVEATKRKKRSSESSAGVSSPATVETPTELLLRRLTEERQA 110
>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p protein.
Length = 1188
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 123 ESSSGESDDENQND-ISDQQLQEMIRRKKIE 212
E E+DD+NQN+ +SD Q QE ++ IE
Sbjct: 952 EDDDQEADDQNQNEHLSDDQQQEADQQLSIE 982
>AY089391-1|AAL90129.1| 538|Drosophila melanogaster AT21495p
protein.
Length = 538
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 109 PRPEAMAASAFDLPAFMALMRDAFLVPNSCSPGI 8
P PEA FD A+ LMR +P S P I
Sbjct: 449 PEPEAFKPERFDNGAYQELMRKGIFLPFSDGPRI 482
>AY069837-1|AAL39982.1| 874|Drosophila melanogaster SD08060p
protein.
Length = 874
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 285 SIHNTPERPTKSERRSSATPPLDSETPEKILDRRLSKDKKS 407
S+ T + SE + + P ETP ++L RRL++++++
Sbjct: 77 SVEATKRKKRSSESSAGVSSPATVETPTELLLRRLTEERQA 117
>AJ389385-1|CAB52135.1| 378|Drosophila melanogaster Nucleotide
excision repair protein protein.
Length = 378
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 263 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 294
>AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant
protein.
Length = 1257
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 1142 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 1173
>AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein.
Length = 1236
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 1121 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 1152
>AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide
excision repair proteinMUS201 protein.
Length = 1236
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 1121 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 1152
>AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair
endonuclease protein.
Length = 1236
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 1121 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 1152
>AE014297-4357|AAF56879.1| 872|Drosophila melanogaster CG14514-PA
protein.
Length = 872
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +3
Query: 285 SIHNTPERPTKSERRSSATPPLDSETPEKILDRRLSKDKKS 407
S+ T + SE + + P ETP ++L RRL++++++
Sbjct: 77 SVEATKRKKRSSESSAGVSSPATVETPTELLLRRLTEERQA 117
>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
isoform B protein.
Length = 1188
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 123 ESSSGESDDENQND-ISDQQLQEMIRRKKIE 212
E E+DD+NQN+ +SD Q QE ++ IE
Sbjct: 952 EDDDQEADDQNQNEHLSDDQQQEADQQLSIE 982
>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
isoform A protein.
Length = 1188
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 123 ESSSGESDDENQND-ISDQQLQEMIRRKKIE 212
E E+DD+NQN+ +SD Q QE ++ IE
Sbjct: 952 EDDDQEADDQNQNEHLSDDQQQEADQQLSIE 982
>AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-PC,
isoform C protein.
Length = 1236
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 1121 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 1152
>AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-PB,
isoform B protein.
Length = 1236
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 1121 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 1152
>AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-PA,
isoform A protein.
Length = 1257
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 270 DGVSTSIHNTPERPTK--SERRSSATPPLDSE 359
D +S I TPE+P K RR+ A PP D +
Sbjct: 1142 DKMSGKIDETPEKPKKVTRTRRAKAAPPTDDD 1173
>AE014134-428|AAF51242.3| 538|Drosophila melanogaster CG18559-PA
protein.
Length = 538
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -1
Query: 109 PRPEAMAASAFDLPAFMALMRDAFLVPNSCSPGI 8
P PEA FD A+ LMR +P S P I
Sbjct: 449 PEPEAFKPERFDNGAYQELMRKGIFLPFSDGPRI 482
>Z98269-5|CAB10973.1| 1741|Drosophila melanogaster
EG:87B1.2,FBgn0004655;wapl protein.
Length = 1741
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 264 DGDGVSTSIHNTPERPTKSERRSSATPPLDSE--TPEKILDRRLSKDKKSV 410
DGDG+S PE+P+ + + P + + PE R L + +K+V
Sbjct: 195 DGDGLSDPASEQPEQPSSASGKQKQKKPKEEKKLKPEAPPSRVLGRARKAV 245
>U40214-1|AAA91230.1| 1768|Drosophila melanogaster parallel sister
chromatids protein protein.
Length = 1768
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 264 DGDGVSTSIHNTPERPTKSERRSSATPPLDSE--TPEKILDRRLSKDKKSV 410
DGDG+S PE+P+ + + P + + PE R L + +K+V
Sbjct: 195 DGDGLSDPASEQPEQPSSASGKQKQKKPKEEKKLKPEAPPSRVLGRARKAV 245
>AY119606-1|AAM50260.1| 1108|Drosophila melanogaster LD29979p
protein.
Length = 1108
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 264 DGDGVSTSIHNTPERPTKSERRSSATPPLDSE--TPEKILDRRLSKDKKSV 410
DGDG+S PE+P+ + + P + + PE R L + +K+V
Sbjct: 195 DGDGLSDPASEQPEQPSSASGKQKQKKPKEEKKLKPEAPPSRVLGRARKAV 245
>AE014298-344|AAF45734.1| 1741|Drosophila melanogaster CG3707-PA,
isoform A protein.
Length = 1741
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 264 DGDGVSTSIHNTPERPTKSERRSSATPPLDSE--TPEKILDRRLSKDKKSV 410
DGDG+S PE+P+ + + P + + PE R L + +K+V
Sbjct: 195 DGDGLSDPASEQPEQPSSASGKQKQKKPKEEKKLKPEAPPSRVLGRARKAV 245
>BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p
protein.
Length = 828
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +3
Query: 138 ESDDENQNDISDQQLQEMIRRKK 206
+SDD++ +DIS+ + ++ +RRK+
Sbjct: 244 KSDDDDDDDISEAEYEQELRRKQ 266
>BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p
protein.
Length = 2062
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 472 GISVSAHNVPQNYSRDRERATITP 495
>AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcription
factor protein.
Length = 2061
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 472 GISVSAHNVPQNYSRDRERATITP 495
>AF024604-1|AAB82274.1| 1751|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1751
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 469 GISVSAHNVPQNYSRDRERATITP 492
>AF024603-1|AAB82273.1| 1773|Drosophila melanogaster transcriptional
co-repressor SIN3A protein.
Length = 1773
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 469 GISVSAHNVPQNYSRDRERATITP 492
>AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA
protein.
Length = 943
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/23 (39%), Positives = 19/23 (82%)
Frame = +3
Query: 138 ESDDENQNDISDQQLQEMIRRKK 206
+SDD++ +DIS+ + ++ +RRK+
Sbjct: 244 KSDDDDDDDISEAEYEQELRRKQ 266
>AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD,
isoform D protein.
Length = 1751
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 472 GISVSAHNVPQNYSRDRERATITP 495
>AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA,
isoform A protein.
Length = 1776
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 472 GISVSAHNVPQNYSRDRERATITP 495
>AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC,
isoform C protein.
Length = 2062
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 472 GISVSAHNVPQNYSRDRERATITP 495
>AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB,
isoform B protein.
Length = 2062
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 273 GVSTSIHNTPERPTKSERRSSATP 344
G+S S HN P+ ++ R++ TP
Sbjct: 472 GISVSAHNVPQNYSRDRERATITP 495
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,168,532
Number of Sequences: 53049
Number of extensions: 285241
Number of successful extensions: 1396
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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