Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0618
(680 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 200 3e-50
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 196 3e-49
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 189 6e-47
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 169 7e-41
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 160 3e-38
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 157 2e-37
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 142 9e-33
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 134 1e-30
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 131 1e-29
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 117 2e-25
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 112 9e-24
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 109 8e-23
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 97 3e-19
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 93 4e-18
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 76 7e-13
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 74 3e-12
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 60 4e-08
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 60 5e-08
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 60 6e-08
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 58 1e-07
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 57 3e-07
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 54 3e-06
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 50 4e-05
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 50 4e-05
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 50 4e-05
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 50 7e-05
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 49 9e-05
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 48 2e-04
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 45 0.001
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 43 0.008
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 42 0.011
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 42 0.018
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 41 0.032
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 41 0.032
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 40 0.042
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 38 0.086
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 0.91
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q2RRC4 Cluster: DNA helicase, putative; n=1; Rhodospiri... 34 3.7
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_A1TPK1 Cluster: Gamma-glutamyltransferase; n=5; Proteob... 33 4.9
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 6.4
UniRef50_A4JQL7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.4
UniRef50_A0X1E3 Cluster: Diguanylate cyclase; n=2; Shewanella|Re... 33 6.4
UniRef50_A4C8T4 Cluster: Probable phage protein; n=1; Pseudoalte... 33 8.5
UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.5
UniRef50_A7EB45 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 8.5
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 200 bits (487), Expect = 3e-50
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
NVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQGFPM
Sbjct: 4 NVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPM 63
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 341
KQGVLTN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL
Sbjct: 64 KQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALAL 111
Score = 130 bits (313), Expect = 4e-29
Identities = 66/113 (58%), Positives = 81/113 (71%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKEN 519
L++V+KG ++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR LP K+GK
Sbjct: 111 LIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK-- 168
Query: 520 AKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKKE 678
KPR KAPKIQRL+TPVVLQ +EAEY K+L R+++
Sbjct: 169 -KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQ 220
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 196 bits (479), Expect = 3e-49
Identities = 90/114 (78%), Positives = 99/114 (86%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQGFPM
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPM 63
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALGYCAQG 359
KQGVLT+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL L +G
Sbjct: 64 KQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKG 117
Score = 131 bits (317), Expect = 1e-29
Identities = 73/113 (64%), Positives = 81/113 (71%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKEN 519
LVIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 111 LVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK-- 167
Query: 520 AKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKKE 678
KPR KAPKIQRLVTP VLQ AEYAKLLA+R KE
Sbjct: 168 -KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKE 219
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 189 bits (460), Expect = 6e-47
Identities = 83/114 (72%), Positives = 95/114 (83%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQGFPM
Sbjct: 4 NISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQGFPM 63
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALGYCAQG 359
KQG++TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+L +G
Sbjct: 64 KQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKG 117
Score = 136 bits (330), Expect = 4e-31
Identities = 70/113 (61%), Positives = 80/113 (70%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKEN 519
LVIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R LP KEGK
Sbjct: 111 LVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK-- 168
Query: 520 AKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKKE 678
K + KAPKIQRLVTPVVLQ A+YAKLLA+R KE
Sbjct: 169 -KAKSKAPKIQRLVTPVVLQRKRKRLALKRQRAQKCKQEAADYAKLLAKRAKE 220
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 169 bits (410), Expect = 7e-41
Identities = 81/108 (75%), Positives = 90/108 (83%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
NVSYPATGCQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPM
Sbjct: 4 NVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPM 63
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 341
KQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L L
Sbjct: 64 KQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTL 110
Score = 34.3 bits (75), Expect(2) = 0.084
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 397 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 546
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
Score = 24.2 bits (50), Expect(2) = 0.084
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 640 AEYAKLLAQRKKE 678
AEY KLL +RKKE
Sbjct: 165 AEYVKLLVKRKKE 177
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 160 bits (389), Expect = 3e-38
Identities = 72/114 (63%), Positives = 88/114 (77%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+SYP TG QK E+ D+ K IF++KRMG VEAD LG+E+KGYVL++ GGNDKQGFPM
Sbjct: 4 NISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQGFPM 63
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALGYCAQG 359
+QGVL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +G
Sbjct: 64 RQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKG 117
Score = 81.8 bits (193), Expect = 1e-14
Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAKEG 510
L +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D V++ +++R K+G
Sbjct: 111 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDG 170
Query: 511 KENAKPRHKAPKIQRLVT 564
K+ R KAPKIQRLVT
Sbjct: 171 KK----RQKAPKIQRLVT 184
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 157 bits (381), Expect = 2e-37
Identities = 71/114 (62%), Positives = 86/114 (75%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+SYP TG QK E+ D+ K IF +K+MG EVE D LGDE+KGYV ++AGGNDK GFPM
Sbjct: 4 NISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDGFPM 63
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALGYCAQG 359
KQGV+ RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL +G
Sbjct: 64 KQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKG 117
Score = 85.8 bits (203), Expect = 9e-16
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Frame = +1
Query: 310 LLTPISRSWLLVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYV 480
++ P R L IV+KG EI GLT +PR+LGPKRA+ I+KLF L KEDD +++ V
Sbjct: 101 IVGPDMRVLALQIVKKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSV 160
Query: 481 VKRVLPAKEGKENAKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLL 660
++R +GK+ R K PKIQRL+TP + +++ EY K L
Sbjct: 161 IRRTFKTAKGKD----RTKCPKIQRLITPERILRKKVYKAEKTQRYVKTNAAKEEYEKFL 216
Query: 661 AQRKKE 678
++ KK+
Sbjct: 217 SEWKKQ 222
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 142 bits (343), Expect = 9e-33
Identities = 67/114 (58%), Positives = 80/114 (70%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQGFPM
Sbjct: 45 NISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFPM 104
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALGYCAQG 359
QGVLTN+RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +G
Sbjct: 105 MQGVLTNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKG 158
Score = 88.2 bits (209), Expect = 2e-16
Identities = 45/75 (60%), Positives = 54/75 (72%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKEN 519
L +V+KG EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R + +N
Sbjct: 152 LTLVKKGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-----SKN 206
Query: 520 AKPRHKAPKIQRLVT 564
K R PKIQRLVT
Sbjct: 207 GKNRFIKPKIQRLVT 221
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 134 bits (325), Expect = 1e-30
Identities = 57/105 (54%), Positives = 78/105 (74%)
Frame = +3
Query: 21 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMK 200
++YP G Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQGFPMK
Sbjct: 5 LAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQGFPMK 64
Query: 201 QGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 335
QGV+T R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L
Sbjct: 65 QGVITPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISAL 109
Score = 57.2 bits (132), Expect = 3e-07
Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +1
Query: 343 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYVVKRVLPAKEGKEN 519
V+++KG +EI GLT VPRR GPKRAS +R +F ++ + D + V+KR K GK
Sbjct: 112 VVLQKGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKR--EVKPGK-- 167
Query: 520 AKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKKE 678
+PK+QRL+T + +Y LL Q++K+
Sbjct: 168 ----FTSPKVQRLITARRVARKNRMLKERKEKREATKKKAEQYQALLKQQQKQ 216
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 131 bits (317), Expect = 1e-29
Identities = 60/106 (56%), Positives = 79/106 (74%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
NV+YPATG K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GFPM
Sbjct: 3 NVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPM 62
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVL 335
GV TN+RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL
Sbjct: 63 MTGVATNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVL 108
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/49 (53%), Positives = 40/49 (81%)
Frame = +1
Query: 343 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 489
++V+KG EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 111 IVVKKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 117 bits (282), Expect = 2e-25
Identities = 50/74 (67%), Positives = 61/74 (82%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQGFPM
Sbjct: 4 NISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFPM 63
Query: 198 KQGVLTNSRVRLLM 239
KQ VLT+ R+ LL+
Sbjct: 64 KQDVLTHDRIHLLL 77
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = +1
Query: 364 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAK 525
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--K 137
Query: 526 PRHKAPKIQRL 558
+ + K QRL
Sbjct: 138 RQEQIAKRQRL 148
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 112 bits (269), Expect = 9e-24
Identities = 52/108 (48%), Positives = 69/108 (63%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+S P TG K + D K + + RM +E + LG+E+ G R+ GGND QGFPM
Sbjct: 10 NISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGFPM 69
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 341
QGVL + R RLL+ +G CY RR+GERKRKS+RGCIV +L L++
Sbjct: 70 YQGVLKSQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSV 117
Score = 56.0 bits (129), Expect = 8e-07
Identities = 35/80 (43%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL--SKEDDVRRYVVKRV---LPAK 504
+V+V G + +PGLTD VP+RL PKRASKIR+LF L +K D + +V + L +
Sbjct: 117 VVLVDAGDKTLPGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELIKELGHE 176
Query: 505 EGKENAKPRHKAPKIQRLVT 564
+N + + K PK+QR+VT
Sbjct: 177 VTLKNGEKKLKYPKVQRVVT 196
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 109 bits (261), Expect = 8e-23
Identities = 51/108 (47%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N++ P+TG Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQGFPM
Sbjct: 4 NIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPM 63
Query: 198 KQGVLTNSRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVL 335
K+G+L+ SRV++L+ KG + R + GER RKSVRGCIV +SVL
Sbjct: 64 KEGILSPSRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVL 111
Score = 41.5 bits (93), Expect = 0.018
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 379 LTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRL 558
+T+ N + L KR+S +RK+ L+K DD+R++ +K AK+ K KIQRL
Sbjct: 125 ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK---IAKDFKNKV-------KIQRL 174
Query: 559 VTPVVLQ 579
+TP+ +Q
Sbjct: 175 ITPIKIQ 181
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 97.1 bits (231), Expect = 3e-19
Identities = 47/109 (43%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 194
N++YP G K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK GFP
Sbjct: 4 NIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFP 63
Query: 195 MKQGVLTNSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVL 335
M GVL +SRV LL+ +G + R GER+RK+VRGC++ ++++++
Sbjct: 64 MVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALV 112
Score = 93.9 bits (223), Expect = 3e-18
Identities = 53/112 (47%), Positives = 67/112 (59%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKEN 519
+ I + G Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV+R + K GK
Sbjct: 114 VTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGK-- 170
Query: 520 AKPRHKAPKIQRLVTPVVLQXXXXXXXXXXXXXXXXXSSEAEYAKLLAQRKK 675
K R KAPKIQRL+TP V + EY +L+A ++
Sbjct: 171 -KDRLKAPKIQRLITPRVKARRAKKAKDAIAKVRASAAERREYLRLIASNRR 221
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 93.5 bits (222), Expect = 4e-18
Identities = 45/97 (46%), Positives = 67/97 (69%)
Frame = +3
Query: 51 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 230
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 231 LLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 341
L+SKG + YR RR G R+RKSVRG IV + VL L
Sbjct: 60 PLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNL 96
Score = 36.3 bits (80), Expect = 0.69
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK--EGK 513
L+I+R G +EI GLT+ P++ K+RK+F + E+ ++ +L ++ + K
Sbjct: 96 LIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPK 155
Query: 514 ENAKPRHKAPKIQR 555
+ K RH +++R
Sbjct: 156 KIPKIRHNGKRMKR 169
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 76.2 bits (179), Expect = 7e-13
Identities = 39/67 (58%), Positives = 45/67 (67%)
Frame = +3
Query: 159 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLA 338
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 339 LGYCAQG 359
L +G
Sbjct: 116 LQVVKKG 122
Score = 74.5 bits (175), Expect = 2e-12
Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE-GKE 516
L +V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D RV+ ++E G +
Sbjct: 116 LQVVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKAD--------RVISSEEHGPQ 167
Query: 517 N-AKPRHKAPKIQRLVT 564
K R KAPKIQRLVT
Sbjct: 168 RYGKKRQKAPKIQRLVT 184
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 146
N+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 4 NISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 60.5 bits (140), Expect = 4e-08
Identities = 36/95 (37%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +3
Query: 48 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 221
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 222 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 326
+ R L+S G + PR GER+RK+VRG + ++
Sbjct: 193 KKRALLS-GPPGFWPREKGERRRKTVRGNTISEDI 226
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 60.1 bits (139), Expect = 5e-08
Identities = 38/104 (36%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Frame = +3
Query: 21 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQL--------GDEWKGYV-LRVAGG 173
+S P +G K E+ ++ KR+G ++ A +L G E+ V L + GG
Sbjct: 8 ISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDVKLEIRGG 66
Query: 174 NDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 305
DK GFPM+ + RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 67 TDKDGFPMRPDIHGPRRVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 59.7 bits (138), Expect = 6e-08
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Frame = +3
Query: 21 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLG---DEWKGYV------LRVAGG 173
+S P G K E+ ++ +R+G E+ A +LG E G L++ GG
Sbjct: 8 ISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADAKLKITGG 66
Query: 174 NDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 326
DK GFPM+ V RV++L+S+G +RPR GER++K+V G + N+
Sbjct: 67 TDKDGFPMRPDVHGPRRVKILLSRGPG-FRPRERGERRKKTVHGNTISPNI 116
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 58.4 bits (135), Expect = 1e-07
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = +3
Query: 99 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 278
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 279 ERKRKSVRGCIVDANLSVLALGYCAQG 359
R+RK+VRG + ++S + + +G
Sbjct: 87 LRRRKTVRGNTIADDISQINVKVSERG 113
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 57.2 bits (132), Expect = 3e-07
Identities = 37/104 (35%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Frame = +3
Query: 21 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFP 194
+S P TG QK+ E + ++L K++G +V + + D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFP 62
Query: 195 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 326
M+ + +R RLL+S G +RP+ G RKRK VRG ++ ++
Sbjct: 63 MRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDI 105
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +3
Query: 21 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMK 200
V+ P +G FEV D F + +GA V+ +G + GY + + GG+D G PM+
Sbjct: 8 VADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMR 64
Query: 201 QGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 305
+ V + + +L+ +G + + P DGERKR +VRG
Sbjct: 65 EDVDGSDLMEVLL-EGGAGFNPDEDGERKRVTVRG 98
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 50.4 bits (115), Expect = 4e-05
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N++ P G Q + DE I K +G +E LG+++ + GG+DKQGF +
Sbjct: 4 NIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQGFLL 62
Query: 198 KQGVLTNSRVRLLMSKGHSCYRP--RRDGERKRKSVRGCIVDANLSVLAL 341
K+ + T R+++ + KG R +R K+++VRG I+ + +S + L
Sbjct: 63 KKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVRGGILSSEISSINL 112
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 63 VDEHKLRIFYEKRMGAEVEADQL-GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 239
VD++K ++G EA+QL G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 240 SKGHSCYRPRRDGERKRKSVRG 305
S G + P +GER+RK++RG
Sbjct: 178 S-GPPGFYPNENGERRRKTIRG 198
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/80 (30%), Positives = 49/80 (61%)
Frame = +3
Query: 96 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 275
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 276 GERKRKSVRGCIVDANLSVL 335
G R+RKS+RG + +++++
Sbjct: 85 GLRRRKSLRGNTISKDITLI 104
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +3
Query: 96 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 275
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 276 GERKRKSVR 302
GERKRK +R
Sbjct: 89 GERKRKMIR 97
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +3
Query: 147 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 305
GY L + GG+D GFPM + + R+L+S G + PR GER+RK+VRG
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRG 197
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 147 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 314
G ++ GG D G PM GV + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +3
Query: 102 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 281
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 282 RKRKSVRG 305
R RK VRG
Sbjct: 95 RTRKLVRG 102
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 42.7 bits (96), Expect = 0.008
Identities = 30/107 (28%), Positives = 59/107 (55%)
Frame = +3
Query: 21 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMK 200
++ P TG E+ E ++ +++G EV D + + GY +++ GG+ GF M+
Sbjct: 8 IADPKTGKTYKREIPSE-RMSSLIGRKIGEEV--DGVFFDLVGYKMKITGGSSVDGFAMR 64
Query: 201 QGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 341
+ T + ++L+ K S YR ++G RKR + RG I+ ++++ + L
Sbjct: 65 PDLQTQGKKQILV-KYTSGYR-GKNGIRKRITARGSIIGSDITQINL 109
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = -1
Query: 293 FTFSLSIAARSVT*VAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 135
FT + ++AA + AL H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 161 FTLASAVAAEAAR--ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 41.5 bits (93), Expect = 0.018
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Frame = +3
Query: 21 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEW---KGYVLRVAGGNDKQGF 191
+S P +G + FE+ D R F ++G E++ L D KG +R+ GG+ +G
Sbjct: 8 LSDPMSGKARQFEIKDPLAQR-FIGLKIGDELDGVILKDLIELPKGAKIRITGGSGIEGA 66
Query: 192 PMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 305
PM GV + + +++ G Y P + G +K+K VRG
Sbjct: 67 PMHPGVPGPVK-KYILADGPPGYWPPKKGMKKKKLVRG 103
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 40.7 bits (91), Expect = 0.032
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +3
Query: 102 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 281
+G E +A +G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 282 RKRKSVRGCIVDANL 326
R RK +RG V +
Sbjct: 89 RVRKLMRGNTVSEEI 103
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 40.7 bits (91), Expect = 0.032
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +3
Query: 147 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 305
GY +++ GG D GF MK + R R+L + G Y P+ G+R+RK +RG
Sbjct: 47 GYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLPGQRRRKMMRG 98
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 40.3 bits (90), Expect = 0.042
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 18 NVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPM 197
N+S+ Q L EV + KLR FYEK M E+ + +E N + F M
Sbjct: 4 NISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIFSM 52
Query: 198 KQGVLTNSRVRLLMSKGHS-CYRPRRDGERKRKSVRGCI 311
KQ VL + RV LL++ HS Y+P R E S++ +
Sbjct: 53 KQEVLIHFRVHLLLNNLHSYIYKPLRTREMNYTSLQDAV 91
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 222 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 341
R+RLL K HSC+ PR + RK K+VR V+AN+S L L
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTL 57
Score = 34.3 bits (75), Expect(2) = 0.086
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 397 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 546
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
Score = 24.2 bits (50), Expect(2) = 0.086
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 640 AEYAKLLAQRKKE 678
AEY KLL +RKKE
Sbjct: 112 AEYVKLLVKRKKE 124
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 35.9 bits (79), Expect = 0.91
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 90 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 209
Y K++G ++ ++G + GY L++ GG+D GFPM++ V
Sbjct: 31 YGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 247
G C RWR ++ + DE G + PC+ DV+G
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_Q2RRC4 Cluster: DNA helicase, putative; n=1; Rhodospirillum
rubrum ATCC 11170|Rep: DNA helicase, putative -
Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255)
Length = 1697
Score = 33.9 bits (74), Expect = 3.7
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +1
Query: 250 THVTDRAAMERENVNQFVDVLLTPISR-SWL---LVIVRKGAQEIPGLTDGNVPRRLGPK 417
T + A+ R D LTP R +WL LV+V+K A ++ T PR L
Sbjct: 1596 TRPANGVAVARGGALHMNDAPLTPQRRGAWLQAALVVVQKAANDLNPTT--GEPRVLNAW 1653
Query: 418 RASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKP 528
+R+ L D+R+ V R AK G+E A+P
Sbjct: 1654 AHWFVRREATLVAIADIRKGVKSRAKRAKAGEEAAEP 1690
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 340 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 480
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_A1TPK1 Cluster: Gamma-glutamyltransferase; n=5;
Proteobacteria|Rep: Gamma-glutamyltransferase -
Acidovorax avenae subsp. citrulli (strain AAC00-1)
Length = 546
Score = 33.5 bits (73), Expect = 4.9
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 316 TPISRSWLLVIVRKGAQE-IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRV 492
TP++ + ++ + AQE I +G + RR+ ++ L L DD+RRY V+RV
Sbjct: 199 TPLANPGMADVLEQVAQEGIASFYEGELARRM----VEHVQSLGGLLSLDDLRRYAVRRV 254
Query: 493 LP 498
P
Sbjct: 255 AP 256
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 6.4
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 213 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 115
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_A4JQL7 Cluster: Putative uncharacterized protein; n=1;
Burkholderia vietnamiensis G4|Rep: Putative
uncharacterized protein - Burkholderia vietnamiensis
(strain G4 / LMG 22486) (Burkholderiacepacia (strain
R1808))
Length = 109
Score = 33.1 bits (72), Expect = 6.4
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 253 HVTDRA-AMERENVNQFVDVLLTPISRSWLLVIVRKGAQEIPGLTDGNVPRRLGPKRASK 429
+V +RA ++E + +Q ++VLL I+R+ + + R E+ G P RLG K +
Sbjct: 7 NVGERAGSIESGDCSQRLEVLLDSIARTCGIAVERARPVEVDD--GGPAPIRLGNKTIKQ 64
Query: 430 IRKLFNLSKEDDVRRY 477
IRKL ++ D V Y
Sbjct: 65 IRKLRHVLAIDTVLNY 80
>UniRef50_A0X1E3 Cluster: Diguanylate cyclase; n=2; Shewanella|Rep:
Diguanylate cyclase - Shewanella pealeana ATCC 700345
Length = 684
Score = 33.1 bits (72), Expect = 6.4
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -3
Query: 498 WEHAFDDITTYIIFFAKVEQLTDFGSTFGT*TAGYISISQSRNFLGTLAHNNQEPRPRD- 322
WE A D+I + K + DFG F AG + ++ + N++ + H Q +D
Sbjct: 302 WEKARDNIEQQFLLAVKASEFNDFG-FFAHLNAGRVELA-THNYVDAIEHLEQAISLKDT 359
Query: 321 WRQQYIHELIYVF 283
R+QY Y+F
Sbjct: 360 TREQYFITSSYLF 372
>UniRef50_A4C8T4 Cluster: Probable phage protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Probable phage
protein - Pseudoalteromonas tunicata D2
Length = 210
Score = 32.7 bits (71), Expect = 8.5
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +3
Query: 198 KQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALGYCAQGCPGNSW 377
K+G T + R L+++G+S R + G KR S++ + NLS G+ + G+S
Sbjct: 118 KEGPATRNLARALIAEGYSIPRGKGKGS-KRPSIKW--ITTNLSENQAGFLLRELKGSSS 174
Query: 378 ID*WKCTPPSRS 413
W+ P+RS
Sbjct: 175 KSTWQIELPARS 186
>UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1146
Score = 32.7 bits (71), Expect = 8.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 385 DGNVPRRLGPKRASKIRK-LFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQR 555
D + + PK+ S +K + + S EDD K++L + + E KPR K+P+ +R
Sbjct: 1012 DSSDEEEIKPKQKSPQKKPILSSSSEDDAIPPPKKKLLDSSDDDEEIKPRQKSPQKKR 1069
>UniRef50_A7EB45 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 700
Score = 32.7 bits (71), Expect = 8.5
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 416 NVLPKSVSCSTLAKKMMYVVMSSNACSQPRKEK 514
+V+P+S + S L++ M+ SN S+PRKEK
Sbjct: 69 SVMPESRNSSLLSQSAMFATQVSNRISEPRKEK 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,268,121
Number of Sequences: 1657284
Number of extensions: 14024070
Number of successful extensions: 41220
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 39809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41177
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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