Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0618
         (680 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.3  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   7.1  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   7.1  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   7.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   9.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.3  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/44 (20%), Positives = 24/44 (54%)
 Frame = -3

Query: 543 RCLMSGFSIFFSFLGWEHAFDDITTYIIFFAKVEQLTDFGSTFG 412
           + +  G   ++  + + H F+ +  Y ++ A + Q+++  +TFG
Sbjct: 491 KTVSDGIRHYYVNVTFPHLFNGLVDYSLWKALIFQISNLQTTFG 534


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 448 LSKEDDVRRYVVKRVLPAKEGKENAK 525
           L +E+D+ +  +KRV   KE   N K
Sbjct: 71  LDEENDINQGGLKRVSALKEKNPNLK 96


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 30  PATGCQKLFEVVDEHKLRI 86
           P+TG Q + +VV  HKL++
Sbjct: 61  PSTGEQWMQKVVSFHKLKL 79


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 30  PATGCQKLFEVVDEHKLRI 86
           P+TG Q + +VV  HKL++
Sbjct: 61  PSTGEQWMQKVVSFHKLKL 79


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 168 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 40
           Q H  H P IH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 168 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 40
           Q H  H P IH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 303 GCIVDANLSVLALGYC 350
           GC++  N  V A  YC
Sbjct: 541 GCLIQFNTIVFAFCYC 556


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 324 LSVLALGYCAQGCPGNSWID 383
           +S L +G+CA    G  WI+
Sbjct: 75  VSSLLIGFCASIYVGTVWIN 94


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = -3

Query: 168 QRHEVHSPSIHRLTDQPLLRRPCAFRKRYEACARPPLRTTSGI 40
           Q H  H P IH     P+L       +      +PP+ ++S I
Sbjct: 88  QLHSHHGPPIHHQIRPPILHDTQPMCESLN--TQPPVTSSSNI 128


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,750
Number of Sequences: 336
Number of extensions: 3280
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)